RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 C1orf220Q5T0J3 134 aa21.86■■□□□ 1.09
SPNS1-203ENST00000334536 RASIP1Q5U651 963 aa21.86■■□□□ 1.09
SPNS1-203ENST00000334536 HAUS6Q7Z4H7 955 aa21.86■■□□□ 1.09
SPNS1-203ENST00000334536 PALB2Q86YC2 1186 aa21.86■■□□□ 1.09
SPNS1-203ENST00000334536 ZBTB8BQ8NAP8 495 aaPredicted RBP21.86■■□□□ 1.09
SPNS1-203ENST00000334536 PROCA1Q8NCQ7 364 aaPredicted RBP21.86■■□□□ 1.09
SPNS1-203ENST00000334536 SLC20A1Q8WUM9 679 aa21.86■■□□□ 1.09
SPNS1-203ENST00000334536 C17orf50Q8WW18 174 aa21.86■■□□□ 1.09
SPNS1-203ENST00000334536 ROPN1BQ9BZX4 212 aaPredicted RBP21.86■■□□□ 1.09
SPNS1-203ENST00000334536 ROPN1Q9HAT0 212 aaPredicted RBP21.86■■□□□ 1.09
SPNS1-203ENST00000334536 COL20A1Q9P218 1284 aa21.86■■□□□ 1.09
SPNS1-203ENST00000334536 RASAL2Q9UJF2 1139 aa21.86■■□□□ 1.09
SPNS1-203ENST00000334536 TCP11X1B4DZS4 312 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 VCAM1P19320 739 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 ATP5DP30049 168 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 MPP3Q13368 585 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 C4orf19Q8IY42 314 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 RTKN2Q8IZC4 609 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 PPP2R3CQ969Q6 453 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 MAML3Q96JK9 1138 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 SMC6Q96SB8 1091 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 CBWD1Q9BRT8 395 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 TLE6Q9H808 572 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 PCDH18Q9HCL0 1135 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 TRIM33Q9UPN9 1127 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 EXOC7Q9UPT5 735 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 GCLMP48507 274 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 NCKAP1LP55160 1127 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 PHEXP78562 749 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 FAM71AQ8IYT1 594 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 CKAP2Q8WWK9 683 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 HIC2Q96JB3 615 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 DDX23Q9BUQ8 820 aaKnown RBP21.85■■□□□ 1.09
SPNS1-203ENST00000334536 PDGFDQ9GZP0 370 aaPredicted RBP21.85■■□□□ 1.09
SPNS1-203ENST00000334536 DDX43Q9NXZ2 648 aaKnown RBP21.85■■□□□ 1.09
SPNS1-203ENST00000334536 PAIP2BQ9ULR5 123 aaKnown RBP21.85■■□□□ 1.09
SPNS1-203ENST00000334536 NR2E1Q9Y466 385 aa21.85■■□□□ 1.09
SPNS1-203ENST00000334536 WDR46O15213 610 aaKnown RBP21.84■■□□□ 1.09
SPNS1-203ENST00000334536 ZFXP17010 805 aaPredicted RBP21.84■■□□□ 1.09
SPNS1-203ENST00000334536 EIF4BP23588 611 aaKnown RBP21.84■■□□□ 1.09
SPNS1-203ENST00000334536 CHRNA3P32297 505 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 MXI1P50539 228 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 IL31RAQ8NI17 732 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 ALG3Q92685 438 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 TRIM51Q9BSJ1 452 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 PHACTR1Q9C0D0 580 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 TMEM39BQ9GZU3 492 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 WNT8AQ9H1J5 351 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 ANKEF1Q9NU02 776 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 TBC1D30Q9Y2I9 924 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.84■■□□□ 1.09
SPNS1-203ENST00000334536 BTBD19C9JJ37 291 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 PHF2O75151 1096 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 GM2AP17900 193 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 YWHABP31946 246 aaKnown RBP21.84■■□□□ 1.09
SPNS1-203ENST00000334536 IFNAR2P48551 515 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 PPFIBP2Q8ND30 876 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 LPAR1Q92633 364 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 DDX27Q96GQ7 796 aaKnown RBP21.84■■□□□ 1.09
SPNS1-203ENST00000334536 RUNDC3BQ96NL0 473 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 ZSWIM1Q9BR11 485 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 YIPF2Q9BWQ6 316 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 GLIS2Q9BZE0 524 aaPredicted RBP21.84■■□□□ 1.09
SPNS1-203ENST00000334536 ZDHHC18Q9NUE0 388 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 PKD2L1Q9P0L9 805 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 PGAP2Q9UHJ9 254 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 GGT7Q9UJ14 662 aa21.84■■□□□ 1.09
SPNS1-203ENST00000334536 NFIBO00712 420 aa21.83■■□□□ 1.09
SPNS1-203ENST00000334536 RAD17O75943 681 aa21.83■■□□□ 1.09
SPNS1-203ENST00000334536 JAK3P52333 1124 aa21.83■■□□□ 1.09
SPNS1-203ENST00000334536 MFAP3P55082 362 aa21.83■■□□□ 1.09
SPNS1-203ENST00000334536 USP46P62068 366 aa21.83■■□□□ 1.09
SPNS1-203ENST00000334536 MTMR1Q13613 665 aa21.83■■□□□ 1.09
SPNS1-203ENST00000334536 DAB2IPQ5VWQ8 1189 aa21.83■■□□□ 1.09
SPNS1-203ENST00000334536 MIGA2Q7L4E1 593 aa21.83■■□□□ 1.09
SPNS1-203ENST00000334536 LENG1Q96BZ8 264 aaPredicted RBP21.83■■□□□ 1.09
SPNS1-203ENST00000334536 TMEM117Q9H0C3 514 aa21.83■■□□□ 1.09
SPNS1-203ENST00000334536 LRRC4CQ9HCJ2 640 aa21.83■■□□□ 1.09
SPNS1-203ENST00000334536 NOCTQ9UK39 431 aaKnown RBP21.83■■□□□ 1.09
SPNS1-203ENST00000334536 PSMD7P51665 324 aa21.82■■□□□ 1.08
SPNS1-203ENST00000334536 YARSP54577 528 aaKnown RBP21.82■■□□□ 1.08
SPNS1-203ENST00000334536 BPIFB4P59827 614 aa21.82■■□□□ 1.08
SPNS1-203ENST00000334536 PSMC5P62195 406 aa21.82■■□□□ 1.08
SPNS1-203ENST00000334536 MRPS9P82933 396 aaKnown RBP21.82■■□□□ 1.08
SPNS1-203ENST00000334536 MTFR1Q15390 333 aa21.82■■□□□ 1.08
SPNS1-203ENST00000334536 LIN52Q52LA3 116 aa21.82■■□□□ 1.08
SPNS1-203ENST00000334536 JAMLQ86YT9 394 aa21.82■■□□□ 1.08
SPNS1-203ENST00000334536 PLEKHO2Q8TD55 490 aa21.82■■□□□ 1.08
SPNS1-203ENST00000334536 SYTL5Q8TDW5 730 aaPredicted RBP21.82■■□□□ 1.08
SPNS1-203ENST00000334536 RSPH1Q8WYR4 309 aa21.82■■□□□ 1.08
SPNS1-203ENST00000334536 RMDN2Q96LZ7 410 aa21.82■■□□□ 1.08
SPNS1-203ENST00000334536 PPP1R12CQ9BZL4 782 aa21.82■■□□□ 1.08
SPNS1-203ENST00000334536 VPS33BQ9H267 617 aa21.82■■□□□ 1.08
SPNS1-203ENST00000334536 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.82■■□□□ 1.08
SPNS1-203ENST00000334536 SUN2Q9UH99 717 aa21.82■■□□□ 1.08
SPNS1-203ENST00000334536 PCYOX1Q9UHG3 505 aa21.82■■□□□ 1.08
SPNS1-203ENST00000334536 TISP43B9A030 160 aa21.82■■□□□ 1.08
SPNS1-203ENST00000334536 PODXLO00592 558 aa21.82■■□□□ 1.08
SPNS1-203ENST00000334536 ATP9BO43861 1147 aa21.82■■□□□ 1.08
SPNS1-203ENST00000334536 ASLP04424 464 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms