RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 VPS50Q96JG6 964 aa17.41■□□□□ 0.38
PDZD8-201ENST00000334464 PRKCBP05771 671 aa17.41■□□□□ 0.38
PDZD8-201ENST00000334464 AGBL2Q5U5Z8 902 aa17.41■□□□□ 0.38
PDZD8-201ENST00000334464 PID1Q7Z2X4 250 aa17.41■□□□□ 0.38
PDZD8-201ENST00000334464 GAS2L3Q86XJ1 694 aa17.41■□□□□ 0.38
PDZD8-201ENST00000334464 DIABLOQ9NR28 239 aa17.41■□□□□ 0.38
PDZD8-201ENST00000334464 ADGRG1Q9Y653 693 aa17.41■□□□□ 0.38
PDZD8-201ENST00000334464 ZNF467Q7Z7K2 595 aaPredicted RBP17.41■□□□□ 0.38
PDZD8-201ENST00000334464 RBM15Q96T37 977 aaKnown RBP eCLIP17.41■□□□□ 0.387e-7■■■■■ 28.3
PDZD8-201ENST00000334464 MB21D2Q8IYB1 491 aaPredicted RBP17.41■□□□□ 0.38
PDZD8-201ENST00000334464 C10orf88Q9H8K7 445 aa17.41■□□□□ 0.38
PDZD8-201ENST00000334464 RAVER2Q9HCJ3 691 aaKnown RBP17.41■□□□□ 0.38
PDZD8-201ENST00000334464 FBXL5Q9UKA1 691 aa17.41■□□□□ 0.38
PDZD8-201ENST00000334464 SPACA6W5XKT8 324 aa17.41■□□□□ 0.38
PDZD8-201ENST00000334464 URB1O60287 2271 aaKnown RBP17.41■□□□□ 0.38
PDZD8-201ENST00000334464 LCP1P13796 627 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 GUCY1A3Q02108 690 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 TSGA10IPQ3SY00 556 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 RAET1EQ8TD07 263 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 THAP11Q96EK4 314 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 ALDH1A2O94788 518 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 NCOA4Q13772 614 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 E4F1Q66K89 784 aaPredicted RBP17.4■□□□□ 0.38
PDZD8-201ENST00000334464 SPATA4Q8NEY3 305 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 ROPN1BQ9BZX4 212 aaPredicted RBP17.4■□□□□ 0.38
PDZD8-201ENST00000334464 DDX47Q9H0S4 455 aaKnown RBP17.4■□□□□ 0.38
PDZD8-201ENST00000334464 ROPN1Q9HAT0 212 aaPredicted RBP17.4■□□□□ 0.38
PDZD8-201ENST00000334464 HSPBP1Q9NZL4 362 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 USP15Q9Y4E8 981 aaPredicted RBP17.4■□□□□ 0.38
PDZD8-201ENST00000334464 E9PCH4 1651 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 TRIM49BA6NDI0 452 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 KLC4Q9NSK0 619 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 PSMD7P51665 324 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 TBC1D10CQ8IV04 446 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 SP8Q8IXZ3 490 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 SEPT12Q8IYM1 358 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 KIAA2013Q8IYS2 634 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 AAASQ9NRG9 546 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 DDX28Q9NUL7 540 aaKnown RBP17.4■□□□□ 0.38
PDZD8-201ENST00000334464 SCN3BQ9NY72 215 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 EIF2S1P05198 315 aaKnown RBP17.4■□□□□ 0.38
PDZD8-201ENST00000334464 STAT5BP51692 787 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 MTA1Q13330 715 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 WDR72Q3MJ13 1102 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 PRRG3Q9BZD7 231 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 MUC3BQ9H195 1237 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 CD209Q9NNX6 404 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 FMO5P49326 533 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 STX3Q13277 289 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 SNX12Q9UMY4 172 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 M0R3G1 203 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 GNL1P36915 607 aaPredicted RBP17.4■□□□□ 0.38
PDZD8-201ENST00000334464 PLA2G4AP47712 749 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 CENPCQ03188 943 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 TTLL9Q3SXZ7 439 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 RNF149Q8NC42 400 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 OR6J1Q8NGC5 347 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 C19orf60Q96EN9 201 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 C7orf25Q9BPX7 421 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 TMEM51Q9NW97 253 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 PIN4Q9Y237 131 aaKnown RBP17.4■□□□□ 0.38
PDZD8-201ENST00000334464 ATXN8OSP0DMR3 200 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 RGS2P41220 211 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 NT5C1AQ9BXI3 368 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 MYH3P11055 1940 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 ROBO2Q9HCK4 1378 aa17.4■□□□□ 0.38
PDZD8-201ENST00000334464 TTC26A0AVF1 554 aa17.39■□□□□ 0.38
PDZD8-201ENST00000334464 DTNBO60941 627 aa17.39■□□□□ 0.38
PDZD8-201ENST00000334464 SUSD4Q5VX71 490 aa17.39■□□□□ 0.38
PDZD8-201ENST00000334464 SYN2Q92777 582 aaPredicted RBP17.39■□□□□ 0.38
PDZD8-201ENST00000334464 ALKQ9UM73 1620 aa17.39■□□□□ 0.38
PDZD8-201ENST00000334464 F5H6K3 240 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 KLRC3Q07444 240 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 CLEC4FQ8N1N0 589 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 PRG3Q9Y2Y8 225 aaPredicted RBP17.39■□□□□ 0.37
PDZD8-201ENST00000334464 SRGAP2O75044 1071 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 TADA2AO75478 443 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 KLC1Q07866 573 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 SNAPC2Q13487 334 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 SHCBP1Q8NEM2 672 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 SLC7A14Q8TBB6 771 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 FAM162AQ96A26 154 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 FLT1P17948 1338 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 CSPG5O95196 566 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 DHX40Q8IX18 779 aaKnown RBP17.39■□□□□ 0.37
PDZD8-201ENST00000334464 DCP1BQ8IZD4 617 aaKnown RBP17.39■□□□□ 0.37
PDZD8-201ENST00000334464 NEDD1Q8NHV4 660 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 C17orf75Q9HAS0 396 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 ZNF521Q96K83 1311 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 PSMA4P25789 261 aaKnown RBP17.39■□□□□ 0.37
PDZD8-201ENST00000334464 MAPK1P28482 360 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 RPAP3Q9H6T3 665 aaPredicted RBP17.39■□□□□ 0.37
PDZD8-201ENST00000334464 HARS2P49590 506 aaKnown RBP17.39■□□□□ 0.37
PDZD8-201ENST00000334464 COG2Q14746 738 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 WLSQ5T9L3 541 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 ARMC6Q6NXE6 501 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 SLITRK1Q96PX8 696 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 SLC30A1Q9Y6M5 507 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 PRRG1O14668 218 aa17.39■□□□□ 0.37
PDZD8-201ENST00000334464 LZTS3O60299 673 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms