RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 SLC38A10Q9HBR0 1119 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 APOBEC3GQ9HC16 384 aaKnown RBP13.08□□□□□ -0.32
VPS33B-201ENST00000333371 BANF1O75531 89 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 SUN1O94901 812 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 PROSCO94903 275 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 EZRP15311 586 aaKnown RBP13.08□□□□□ -0.32
VPS33B-201ENST00000333371 RPL7AP62424 266 aaKnown RBP13.08□□□□□ -0.32
VPS33B-201ENST00000333371 MYO1EQ12965 1108 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 GALNTL6Q49A17 601 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 ARHGEF16Q5VV41 709 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 SWSAP1Q6NVH7 229 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 TMEM270Q6UE05 265 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 MON1BQ7L1V2 547 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 NIPA1Q7RTP0 329 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 TMC2Q8TDI7 906 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 HAPLN2Q9GZV7 340 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 PXMP2Q9NR77 195 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 PICK1Q9NRD5 415 aa13.08□□□□□ -0.32
VPS33B-201ENST00000333371 RASA4BC9J798 803 aa13.07□□□□□ -0.32
VPS33B-201ENST00000333371 RASA4O43374 803 aa13.07□□□□□ -0.32
VPS33B-201ENST00000333371 WDR4P57081 412 aaKnown RBP13.07□□□□□ -0.32
VPS33B-201ENST00000333371 GCNT1Q02742 428 aa13.07□□□□□ -0.32
VPS33B-201ENST00000333371 MIS18BP1Q6P0N0 1132 aa13.07□□□□□ -0.32
VPS33B-201ENST00000333371 KLHL29Q96CT2 875 aa13.07□□□□□ -0.32
VPS33B-201ENST00000333371 RBM15Q96T37 977 aaKnown RBP eCLIP13.07□□□□□ -0.32
VPS33B-201ENST00000333371 ADAM22Q9P0K1 906 aa13.07□□□□□ -0.32
VPS33B-201ENST00000333371 SEPT9Q9UHD8 586 aaPredicted RBP13.07□□□□□ -0.32
VPS33B-201ENST00000333371 DNPEPQ9ULA0 475 aa13.07□□□□□ -0.32
VPS33B-201ENST00000333371 ZNF541Q9H0D2 1346 aa13.07□□□□□ -0.32
VPS33B-201ENST00000333371 POC1B-GALNT4F8VUJ3 575 aa13.07□□□□□ -0.32
VPS33B-201ENST00000333371 VNN1O95497 513 aa13.07□□□□□ -0.32
VPS33B-201ENST00000333371 ATF7P17544 494 aaPredicted RBP13.07□□□□□ -0.32
VPS33B-201ENST00000333371 PIK3CAP42336 1068 aa13.07□□□□□ -0.32
VPS33B-201ENST00000333371 BAATQ14032 418 aaPredicted RBP13.07□□□□□ -0.32
VPS33B-201ENST00000333371 TXNRD3NBQ6F5E7 133 aa13.07□□□□□ -0.32
VPS33B-201ENST00000333371 ECHDC2Q86YB7 292 aa13.07□□□□□ -0.32
VPS33B-201ENST00000333371 C10orf88Q9H8K7 445 aa13.07□□□□□ -0.32
VPS33B-201ENST00000333371 SAYSD1Q9NPB0 183 aa13.07□□□□□ -0.32
VPS33B-201ENST00000333371 SLCO1B3Q9NPD5 702 aa13.07□□□□□ -0.32
VPS33B-201ENST00000333371 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.07□□□□□ -0.32
VPS33B-201ENST00000333371 PCDHB2Q9Y5E7 798 aa13.07□□□□□ -0.32
VPS33B-201ENST00000333371 TAC1P20366 129 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 GCAP28676 217 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 CDC25CP30307 473 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 MAGEA4P43358 317 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 COPS2P61201 443 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 CENPCQ03188 943 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 BNIP1Q12981 228 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 MAMLD1Q13495 774 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 TAB3Q8N5C8 712 aaPredicted RBP13.06□□□□□ -0.32
VPS33B-201ENST00000333371 GRK7Q8WTQ7 553 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 FAM212AQ96EL1 285 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 WRNIP1Q96S55 665 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 MOV10L1Q9BXT6 1211 aaKnown RBP13.06□□□□□ -0.32
VPS33B-201ENST00000333371 AS3MTQ9HBK9 375 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 AVENQ9NQS1 362 aaPredicted RBP13.06□□□□□ -0.32
VPS33B-201ENST00000333371 ANKEF1Q9NU02 776 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 ARL2BPQ9Y2Y0 163 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 PCDHB4Q9Y5E5 795 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 PCDHA10Q9Y5I2 948 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 DOCK1Q14185 1865 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 COL11A1P12107 1806 aaPredicted RBP13.06□□□□□ -0.32
VPS33B-201ENST00000333371 TLR3O15455 904 aaKnown RBP13.06□□□□□ -0.32
VPS33B-201ENST00000333371 STBD1O95210 358 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 CYP1A1P04798 512 aaPredicted RBP13.06□□□□□ -0.32
VPS33B-201ENST00000333371 HARSP12081 509 aaKnown RBP13.06□□□□□ -0.32
VPS33B-201ENST00000333371 SLC8A1P32418 973 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 JAK3P52333 1124 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 SNRPFP62306 86 aaKnown RBP13.06□□□□□ -0.32
VPS33B-201ENST00000333371 DNAJC3Q13217 504 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 R3HDM1Q15032 1099 aaKnown RBP13.06□□□□□ -0.32
VPS33B-201ENST00000333371 MTERF2Q49AM1 385 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 BRDTQ58F21 947 aaPredicted RBP13.06□□□□□ -0.32
VPS33B-201ENST00000333371 C15orf39Q6ZRI6 1047 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 CCDC60Q8IWA6 550 aaPredicted RBP13.06□□□□□ -0.32
VPS33B-201ENST00000333371 C4orf33Q8N1A6 199 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 TMEM143Q96AN5 459 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 PRKAG3Q9UGI9 489 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 GRID1Q9ULK0 1009 aa13.06□□□□□ -0.32
VPS33B-201ENST00000333371 GOLGA8SH3BPF8 625 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 GOLGA8MH3BSY2 632 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 CDH16O75309 829 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 ACO1P21399 889 aaKnown RBP13.05□□□□□ -0.32
VPS33B-201ENST00000333371 KLRC2P26717 231 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 GNA15P30679 374 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 NOMO3P69849 1222 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 GAD2Q05329 585 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 PRAMEF18Q5VWM3 479 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 RHOT1Q8IXI2 618 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 SCYL3Q8IZE3 742 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 MAGEC3Q8TD91 643 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 FNBP1Q96RU3 617 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 POLR3FQ9H1D9 316 aaPredicted RBP13.05□□□□□ -0.32
VPS33B-201ENST00000333371 NKIRAS1Q9NYS0 192 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 FZD1Q9UP38 647 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 FZD9O00144 591 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 ANP32DO95626 131 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 EDN1P05305 212 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 ATP5DP30049 168 aa13.05□□□□□ -0.32
VPS33B-201ENST00000333371 LIG4P49917 911 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms