RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 VIL1P09327 827 aaKnown RBP19.2■□□□□ 0.66
PKP3-201ENST00000331563 HOXD13P35453 343 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 CYP1B1Q16678 543 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 CPNE8Q86YQ8 564 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 PDCD7Q8N8D1 485 aaKnown RBP19.2■□□□□ 0.66
PKP3-201ENST00000331563 OLIG1Q8TAK6 271 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 C10orf82Q8WW14 230 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 WNT8AQ9H1J5 351 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 SYNCQ9H7C4 482 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 TYW1Q9NV66 732 aaKnown RBP19.2■□□□□ 0.66
PKP3-201ENST00000331563 WDR37Q9Y2I8 494 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 EXOC1LA0A1B0GW35 172 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 ESYT2A0FGR8 921 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 SH3BGRP55822 239 aaPredicted RBP19.2■□□□□ 0.66
PKP3-201ENST00000331563 KCNA1Q09470 495 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 AP1B1Q10567 949 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 CBX3Q13185 183 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 QRICH1Q2TAL8 776 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 RSBN1LQ6PCB5 846 aaPredicted RBP19.2■□□□□ 0.66
PKP3-201ENST00000331563 CLNKQ7Z7G1 428 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 SLC35B4Q969S0 331 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 AGPAT1Q99943 283 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 REEP2Q9BRK0 252 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 LGALS13Q9UHV8 139 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 QSER1Q2KHR3 1735 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 WDR91A4D1P6 747 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 EXOC3O60645 756 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 GJA8P48165 433 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 ZBTB16Q05516 673 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 CC2D2BQ6DHV5 1058 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 SMC6Q96SB8 1091 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 BTBD10Q9BSF8 475 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 SIPA1L1O43166 1804 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 SPDYE2BA6NHP3 402 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 LYNP07948 512 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 SPDYE6P0CI01 402 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 STAT4Q14765 748 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 SLC45A4Q5BKX6 768 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 ACER1Q8TDN7 264 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 CCDC17Q96LX7 622 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 CENPKQ9BS16 269 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 IKZF4Q9H2S9 585 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 TRABDQ9H4I3 376 aa19.19■□□□□ 0.66
PKP3-201ENST00000331563 A0A0G2JND7 137 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 GTPBP10A4D1E9 387 aaKnown RBP19.18■□□□□ 0.66
PKP3-201ENST00000331563 ZBTB5O15062 677 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 TP73O15350 636 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 E2F6O75461 281 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 GAS8O95995 478 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 DLGAP5Q15398 846 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 SEPT7Q16181 437 aaKnown RBP19.18■□□□□ 0.66
PKP3-201ENST00000331563 TMEM63BQ5T3F8 832 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 MFSD4BQ5TF39 518 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 TATDN1Q6P1N9 297 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 C17orf50Q8WW18 174 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.18■□□□□ 0.66
PKP3-201ENST00000331563 PAIP2BQ9ULR5 123 aaKnown RBP19.18■□□□□ 0.66
PKP3-201ENST00000331563 PCDHA1Q9Y5I3 950 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 hCG_2014768A0A024R1R8 64 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 FOXN3O00409 490 aaPredicted RBP19.18■□□□□ 0.66
PKP3-201ENST00000331563 SLC16A3O15427 465 aaKnown RBP19.18■□□□□ 0.66
PKP3-201ENST00000331563 MAGEB2O15479 319 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 HNRNPCL1O60812 293 aaKnown RBP19.18■□□□□ 0.66
PKP3-201ENST00000331563 MED24O75448 989 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 EGFRP00533 1210 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 TROVE2P10155 538 aaKnown RBP eCLIP19.18■□□□□ 0.665e-10■■■□□ 18
PKP3-201ENST00000331563 RPA3P35244 121 aaPredicted RBP19.18■□□□□ 0.66
PKP3-201ENST00000331563 CETN2P41208 172 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 FMO5P49326 533 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 SLC12A3P55017 1021 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 OVGP1Q12889 678 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 THOC5Q13769 683 aaKnown RBP19.18■□□□□ 0.66
PKP3-201ENST00000331563 CFAP157Q5JU67 520 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 CAPN12Q6ZSI9 719 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 OGFOD1Q8N543 542 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 ZBTB8BQ8NAP8 495 aaPredicted RBP19.18■□□□□ 0.66
PKP3-201ENST00000331563 SMYD1Q8NB12 490 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 STKLD1Q8NE28 680 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 PSTPIP2Q9H939 334 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 SAR1AQ9NR31 198 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 LNPEPQ9UIQ6 1025 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 BCS1LQ9Y276 419 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 ACTL7BQ9Y614 415 aa19.18■□□□□ 0.66
PKP3-201ENST00000331563 ASTN1O14525 1302 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 RSPH10B2B2RC85 870 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 GSC2O15499 205 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 TCEA3O75764 348 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 HAUS5O94927 633 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 NDUFB10O96000 172 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 RSPH10BP0C881 870 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 TRIM49P0CI25 452 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 TRIM49CP0CI26 452 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 NEK3P51956 506 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 PDK4Q16654 411 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 PHLDB3Q6NSJ2 640 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 OTOAQ7RTW8 1153 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 TRAIPQ9BWF2 469 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 MRIQ9BWK5 157 aa19.17■□□□□ 0.66
PKP3-201ENST00000331563 INTS2Q9H0H0 1204 aaKnown RBP19.17■□□□□ 0.66
PKP3-201ENST00000331563 TLE6Q9H808 572 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms