RNA–Protein interactions for RNA: ENST00000330331.9

RGPD6-202, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2 BASIC

Gene RGPD6, Length 2,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-202ENST00000330331 RBM15Q96T37 977 aaKnown RBP eCLIP16.04■□□□□ 0.16
RGPD6-202ENST00000330331 HERPUD2Q9BSE4 406 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 THTPAQ9BU02 230 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 TRIM55Q9BYV6 548 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 IQCGQ9H095 443 aaKnown RBP16.04■□□□□ 0.16
RGPD6-202ENST00000330331 SAYSD1Q9NPB0 183 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 JAG2Q9Y219 1238 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 ZNF652Q9Y2D9 606 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 MEIS1O00470 390 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 VILLO15195 856 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 BUD23O43709 281 aaKnown RBP16.04■□□□□ 0.16
RGPD6-202ENST00000330331 PIAS1O75925 651 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 ENO1P06733 434 aaKnown RBP16.04■□□□□ 0.16
RGPD6-202ENST00000330331 TRIM49P0CI25 452 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 TRIM49CP0CI26 452 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 SH3D19Q5HYK7 790 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 IZUMO3Q5VZ72 239 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 SHKBP1Q8TBC3 707 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 CCDC110Q8TBZ0 833 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 SLC5A5Q92911 643 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 DGCR14Q96DF8 476 aaKnown RBP16.04■□□□□ 0.16
RGPD6-202ENST00000330331 MXD3Q9BW11 206 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 OSBPL8Q9BZF1 889 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 PTTG2Q9NZH5 202 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 TUBGCP4Q9UGJ1 667 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 DDX25Q9UHL0 483 aaKnown RBP16.04■□□□□ 0.16
RGPD6-202ENST00000330331 PAIP2BQ9ULR5 123 aaKnown RBP16.04■□□□□ 0.16
RGPD6-202ENST00000330331 FRMPD4Q14CM0 1322 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 KIF13BQ9NQT8 1826 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 SMIM31A0A1B0GVY4 71 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 BOLA2-SMG1P6H3BVE0 249 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 CDK4P11802 303 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 GYS1P13807 737 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 KRT4P19013 534 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 RGS2P41220 211 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 DLG1Q12959 904 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 CBWD6Q4V339 395 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 PARP10Q53GL7 1025 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 CBWD3Q5JTY5 395 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 CBWD5Q5RIA9 395 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 POTEGQ6S5H5 508 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 ARHGAP24Q8N264 748 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 ARAP2Q8WZ64 1704 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 NSUN4Q96CB9 384 aaKnown RBP16.04■□□□□ 0.16
RGPD6-202ENST00000330331 KLF6Q99612 283 aaPredicted RBP16.04■□□□□ 0.16
RGPD6-202ENST00000330331 ARHGEF4Q9NR80 690 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 R3HDM2Q9Y2K5 976 aaKnown RBP16.04■□□□□ 0.16
RGPD6-202ENST00000330331 SH3GLB1Q9Y371 365 aa16.04■□□□□ 0.16
RGPD6-202ENST00000330331 ASTN1O14525 1302 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 SCN7AQ01118 1682 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 RSPH10B2B2RC85 870 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 GOLGA8RI6L899 631 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 FCHO1O14526 889 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 SORBS3O60504 671 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 CIB2O75838 187 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 RSPH10BP0C881 870 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 CDK16Q00536 496 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 ORC2Q13416 577 aaPredicted RBP16.03■□□□□ 0.16
RGPD6-202ENST00000330331 C1orf146Q5VVC0 180 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 CLEC4GQ6UXB4 293 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 B3GNT6Q6ZMB0 384 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 ZNF398Q8TD17 642 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 SKA1Q96BD8 255 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.03■□□□□ 0.16
RGPD6-202ENST00000330331 LRRC4BQ9NT99 713 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 PDXKO00764 312 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 TYROBPO43914 113 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 VARSP26640 1264 aaKnown RBP16.03■□□□□ 0.16
RGPD6-202ENST00000330331 RAP1GDS1P52306 607 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 HADHBP55084 474 aaKnown RBP16.03■□□□□ 0.16
RGPD6-202ENST00000330331 PSMC6P62333 389 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 MTMR2Q13614 643 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 FASTKD3Q14CZ7 662 aaKnown RBP16.03■□□□□ 0.16
RGPD6-202ENST00000330331 AMIGO3Q86WK7 504 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 PDSS2Q86YH6 399 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 FAM186BQ8IYM0 893 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 SLC35B4Q969S0 331 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 HSPBAP1Q96EW2 488 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 TTC25Q96NG3 672 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 INTS2Q9H0H0 1204 aaKnown RBP16.03■□□□□ 0.16
RGPD6-202ENST00000330331 VPS37BQ9H9H4 285 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 KCNK13Q9HB14 408 aa16.03■□□□□ 0.16
RGPD6-202ENST00000330331 CACNA1SQ13698 1873 aa16.02■□□□□ 0.16
RGPD6-202ENST00000330331 TULP1O00294 542 aaPredicted RBP16.02■□□□□ 0.16
RGPD6-202ENST00000330331 FSCN2O14926 492 aa16.02■□□□□ 0.16
RGPD6-202ENST00000330331 GCNT3O95395 438 aa16.02■□□□□ 0.16
RGPD6-202ENST00000330331 FMO5P49326 533 aa16.02■□□□□ 0.16
RGPD6-202ENST00000330331 AQP4P55087 323 aa16.02■□□□□ 0.16
RGPD6-202ENST00000330331 ARL4CP56559 192 aa16.02■□□□□ 0.16
RGPD6-202ENST00000330331 SULT2A1Q06520 285 aa16.02■□□□□ 0.16
RGPD6-202ENST00000330331 CYLC2Q14093 348 aaPredicted RBP16.02■□□□□ 0.16
RGPD6-202ENST00000330331 C6orf163Q5TEZ5 329 aa16.02■□□□□ 0.16
RGPD6-202ENST00000330331 PCNX4Q63HM2 1172 aa16.02■□□□□ 0.16
RGPD6-202ENST00000330331 DNAJC14Q6Y2X3 702 aaPredicted RBP16.02■□□□□ 0.16
RGPD6-202ENST00000330331 ALYREFQ86V81 257 aaKnown RBP16.02■□□□□ 0.16
RGPD6-202ENST00000330331 ZNF444Q8N0Y2 327 aaPredicted RBP16.02■□□□□ 0.16
RGPD6-202ENST00000330331 RBM15BQ8NDT2 890 aaKnown RBP16.02■□□□□ 0.16
RGPD6-202ENST00000330331 PYDC1Q8WXC3 89 aa16.02■□□□□ 0.16
RGPD6-202ENST00000330331 SIKE1Q9BRV8 207 aa16.02■□□□□ 0.16
RGPD6-202ENST00000330331 NUP85Q9BW27 656 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms