RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 LSG1Q9H089 658 aaKnown RBP16.32■□□□□ 0.2
CTHRC1-201ENST00000330295 OBP2AQ9NY56 170 aa16.32■□□□□ 0.2
CTHRC1-201ENST00000330295 TNRC6BQ9UPQ9 1833 aaKnown RBP16.32■□□□□ 0.2
CTHRC1-201ENST00000330295 PPME1Q9Y570 386 aa16.32■□□□□ 0.2
CTHRC1-201ENST00000330295 A0A1W2PRU2 124 aa16.31■□□□□ 0.2
CTHRC1-201ENST00000330295 I3L4J1 428 aa16.31■□□□□ 0.2
CTHRC1-201ENST00000330295 B4GALT5O43286 388 aa16.31■□□□□ 0.2
CTHRC1-201ENST00000330295 TRAPPC3O43617 180 aa16.31■□□□□ 0.2
CTHRC1-201ENST00000330295 FTH1P19P0C7X4 201 aa16.31■□□□□ 0.2
CTHRC1-201ENST00000330295 ATXN3P54252 364 aaPredicted RBP16.31■□□□□ 0.2
CTHRC1-201ENST00000330295 FUT2Q10981 343 aa16.31■□□□□ 0.2
CTHRC1-201ENST00000330295 TRIP6Q15654 476 aaKnown RBP16.31■□□□□ 0.2
CTHRC1-201ENST00000330295 STXBP5Q5T5C0 1151 aa16.31■□□□□ 0.2
CTHRC1-201ENST00000330295 SLC23A3Q6PIS1 610 aa16.31■□□□□ 0.2
CTHRC1-201ENST00000330295 IFNLR1Q8IU57 520 aaPredicted RBP16.31■□□□□ 0.2
CTHRC1-201ENST00000330295 SYT12Q8IV01 421 aa16.31■□□□□ 0.2
CTHRC1-201ENST00000330295 PNPLA1Q8N8W4 532 aa16.31■□□□□ 0.2
CTHRC1-201ENST00000330295 RPLP0P6Q8NHW5 317 aa16.31■□□□□ 0.2
CTHRC1-201ENST00000330295 TPSD1Q9BZJ3 242 aa16.31■□□□□ 0.2
CTHRC1-201ENST00000330295 CXCL16Q9H2A7 254 aa16.31■□□□□ 0.2
CTHRC1-201ENST00000330295 PTPRBP23467 1997 aa16.31■□□□□ 0.2
CTHRC1-201ENST00000330295 ADAMTS9Q9P2N4 1935 aa16.31■□□□□ 0.2
CTHRC1-201ENST00000330295 A0A1B0GUA9 196 aa16.3■□□□□ 0.2
CTHRC1-201ENST00000330295 OPHN1O60890 802 aa16.3■□□□□ 0.2
CTHRC1-201ENST00000330295 MCM5P33992 734 aa16.3■□□□□ 0.2
CTHRC1-201ENST00000330295 ABCG1P45844 678 aa16.3■□□□□ 0.2
CTHRC1-201ENST00000330295 EMC2Q15006 297 aa16.3■□□□□ 0.2
CTHRC1-201ENST00000330295 TPGS2Q68CL5 300 aa16.3■□□□□ 0.2
CTHRC1-201ENST00000330295 CD300LGQ6UXG3 332 aa16.3■□□□□ 0.2
CTHRC1-201ENST00000330295 BPIFB1Q8TDL5 484 aa16.3■□□□□ 0.2
CTHRC1-201ENST00000330295 ACDQ96AP0 544 aa16.3■□□□□ 0.2
CTHRC1-201ENST00000330295 CHFRQ96EP1 664 aa16.3■□□□□ 0.2
CTHRC1-201ENST00000330295 CLMPQ9H6B4 373 aa16.3■□□□□ 0.2
CTHRC1-201ENST00000330295 TMEM74BQ9NUR3 256 aa16.3■□□□□ 0.2
CTHRC1-201ENST00000330295 RBM28Q9NW13 759 aaKnown RBP16.3■□□□□ 0.2
CTHRC1-201ENST00000330295 TPCN1Q9ULQ1 816 aa16.3■□□□□ 0.2
CTHRC1-201ENST00000330295 ESYT2A0FGR8 921 aa16.29■□□□□ 0.2
CTHRC1-201ENST00000330295 TNFRSF10BO14763 440 aa16.29■□□□□ 0.2
CTHRC1-201ENST00000330295 EDIL3O43854 480 aa16.29■□□□□ 0.2
CTHRC1-201ENST00000330295 REC8O95072 547 aa16.29■□□□□ 0.2
CTHRC1-201ENST00000330295 CD59P13987 128 aa16.29■□□□□ 0.2
CTHRC1-201ENST00000330295 DRD1P21728 446 aa16.29■□□□□ 0.2
CTHRC1-201ENST00000330295 BRCC3P46736 316 aa16.29■□□□□ 0.2
CTHRC1-201ENST00000330295 POU5F1BQ06416 359 aa16.29■□□□□ 0.2
CTHRC1-201ENST00000330295 MXD4Q14582 209 aaPredicted RBP16.29■□□□□ 0.2
CTHRC1-201ENST00000330295 MAPK6Q16659 721 aa16.29■□□□□ 0.2
CTHRC1-201ENST00000330295 FBXO43Q4G163 708 aa16.29■□□□□ 0.2
CTHRC1-201ENST00000330295 CREB3L3Q68CJ9 461 aa16.29■□□□□ 0.2
CTHRC1-201ENST00000330295 TSTD1Q8NFU3 115 aa16.29■□□□□ 0.2
CTHRC1-201ENST00000330295 GTPBP2Q9BX10 602 aaKnown RBP16.29■□□□□ 0.2
CTHRC1-201ENST00000330295 LRRC3Q9BY71 257 aa16.29■□□□□ 0.2
CTHRC1-201ENST00000330295 ZMYND12Q9H0C1 365 aa16.29■□□□□ 0.2
CTHRC1-201ENST00000330295 FBRSL1Q9HCM7 1045 aaKnown RBP16.29■□□□□ 0.2
CTHRC1-201ENST00000330295 ARID2Q68CP9 1835 aa16.29■□□□□ 0.2
CTHRC1-201ENST00000330295 SLC27A2O14975 620 aa16.28■□□□□ 0.2
CTHRC1-201ENST00000330295 RECQL4O94761 1208 aa16.28■□□□□ 0.2
CTHRC1-201ENST00000330295 MCM2P49736 904 aa16.28■□□□□ 0.2
CTHRC1-201ENST00000330295 CLCNKBP51801 687 aa16.28■□□□□ 0.2
CTHRC1-201ENST00000330295 TFDP1Q14186 410 aa16.28■□□□□ 0.2
CTHRC1-201ENST00000330295 KRT32Q14532 448 aa16.28■□□□□ 0.2
CTHRC1-201ENST00000330295 TMC8Q8IU68 726 aa16.28■□□□□ 0.2
CTHRC1-201ENST00000330295 DAGLBQ8NCG7 672 aa16.28■□□□□ 0.2
CTHRC1-201ENST00000330295 CAMK1GQ96NX5 476 aa16.28■□□□□ 0.2
CTHRC1-201ENST00000330295 C6orf50Q9HD87 102 aa16.28■□□□□ 0.2
CTHRC1-201ENST00000330295 FSCN3Q9NQT6 498 aa16.28■□□□□ 0.2
CTHRC1-201ENST00000330295 THG1LQ9NWX6 298 aaKnown RBP16.28■□□□□ 0.2
CTHRC1-201ENST00000330295 PTPN13Q12923 2485 aa16.28■□□□□ 0.2
CTHRC1-201ENST00000330295 KIAA1549LQ6ZVL6 1849 aa16.28■□□□□ 0.2
CTHRC1-201ENST00000330295 TBX3O15119 743 aa16.27■□□□□ 0.2
CTHRC1-201ENST00000330295 PRAMEF12O95522 483 aa16.27■□□□□ 0.2
CTHRC1-201ENST00000330295 CFIP05156 583 aa16.27■□□□□ 0.2
CTHRC1-201ENST00000330295 DPP6P42658 865 aa16.27■□□□□ 0.2
CTHRC1-201ENST00000330295 PTGER3P43115 390 aa16.27■□□□□ 0.2
CTHRC1-201ENST00000330295 QARSP47897 775 aaKnown RBP16.27■□□□□ 0.2
CTHRC1-201ENST00000330295 CYP4F3Q08477 520 aa16.27■□□□□ 0.2
CTHRC1-201ENST00000330295 NECTIN1Q15223 517 aa16.27■□□□□ 0.2
CTHRC1-201ENST00000330295 ARMCX6Q7L4S7 300 aa16.27■□□□□ 0.2
CTHRC1-201ENST00000330295 LPCAT2Q7L5N7 544 aa16.27■□□□□ 0.2
CTHRC1-201ENST00000330295 C3orf58Q8NDZ4 430 aa16.27■□□□□ 0.2
CTHRC1-201ENST00000330295 PIP4K2CQ8TBX8 421 aa16.27■□□□□ 0.2
CTHRC1-201ENST00000330295 MTRQ99707 1265 aa16.27■□□□□ 0.2
CTHRC1-201ENST00000330295 HPS4Q9NQG7 708 aa16.27■□□□□ 0.2
CTHRC1-201ENST00000330295 AFF4Q9UHB7 1163 aaKnown RBP16.27■□□□□ 0.2
CTHRC1-201ENST00000330295 FBXL5Q9UKA1 691 aa16.27■□□□□ 0.2
CTHRC1-201ENST00000330295 MAFFQ9ULX9 164 aa16.27■□□□□ 0.2
CTHRC1-201ENST00000330295 PCDHB9Q9Y5E1 797 aa16.27■□□□□ 0.2
CTHRC1-201ENST00000330295 MYO16Q9Y6X6 1858 aa16.27■□□□□ 0.19
CTHRC1-201ENST00000330295 ATXN2Q99700 1313 aaKnown RBP16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 PTPRDP23468 1912 aa16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 OTOL1A6NHN0 477 aaPredicted RBP16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 H7C4K7 107 aa16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 CAPN9O14815 690 aa16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 SH3BP5O60239 455 aa16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 EIF5BO60841 1220 aaKnown RBP16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 USP11P51784 963 aa16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 AMPD2Q01433 879 aa16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 RUNX3Q13761 415 aa16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 UPP1Q16831 310 aa16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 ANO7Q6IWH7 933 aa16.26■□□□□ 0.19
CTHRC1-201ENST00000330295 SGMS1Q86VZ5 419 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms