RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 FNBP1Q96RU3 617 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 ANKFY1Q9P2R3 1169 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 ARL2BPQ9Y2Y0 163 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 PCDHB2Q9Y5E7 798 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 TLR3O15455 904 aaKnown RBP18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 ASNSP08243 561 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 TAC1P20366 129 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 GBP2P32456 591 aaPredicted RBP18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 GCNT1Q02742 428 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 BNIP1Q12981 228 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 MAMLD1Q13495 774 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 ZNF394Q53GI3 561 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 STYK1Q6J9G0 422 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 GRK7Q8WTQ7 553 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 TMEM174Q8WUU8 243 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 TMEM143Q96AN5 459 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 TMEM237Q96Q45 408 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 HAPLN2Q9GZV7 340 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 NKIRAS1Q9NYS0 192 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 FZD1Q9UP38 647 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 EXOC1LA0A1B0GW35 172 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 VNN1O95497 513 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 MAGEA4P43358 317 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 BRDTQ58F21 947 aaPredicted RBP18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 MCF2L2Q86YR7 1114 aa18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 CCDC60Q8IWA6 550 aaPredicted RBP18.42■□□□□ 0.54
PTP4A3-201ENST00000329397 ZNF541Q9H0D2 1346 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 EIF4E1BA6NMX2 242 aaKnown RBP18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 KIF1CO43896 1103 aaKnown RBP18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 PLA2G6O60733 806 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 CDH16O75309 829 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 ANP32DO95626 131 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 GNA15P30679 374 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 LIG4P49917 911 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 CLNS1AP54105 237 aaKnown RBP18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 GAD2Q05329 585 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 RNASELQ05823 741 aaKnown RBP18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 MTMR2Q13614 643 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 NIPA1Q7RTP0 329 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 NLRX1Q86UT6 975 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 MOV10L1Q9BXT6 1211 aaKnown RBP18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 POLR3FQ9H1D9 316 aaPredicted RBP18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 SLC38A10Q9HBR0 1119 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 SAE1Q9UBE0 346 aaPredicted RBP18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 GRID1Q9ULK0 1009 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 COL4A5P29400 1685 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 GCAP28676 217 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 ATP5DP30049 168 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 JAK3P52333 1124 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 CENPCQ03188 943 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 WDR44Q5JSH3 913 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 DNAJC14Q6Y2X3 702 aaPredicted RBP18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 ERICH1Q86X53 443 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 PITPNM3Q9BZ71 974 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 ZNF148Q9UQR1 794 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 CTDP1Q9Y5B0 961 aaPredicted RBP18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 PCDHA10Q9Y5I2 948 aa18.41■□□□□ 0.54
PTP4A3-201ENST00000329397 EGFRP00533 1210 aa18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 IFNB1P01574 187 aa18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 CYP1A1P04798 512 aaPredicted RBP18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 NOMO3P69849 1222 aa18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 PKN2Q16513 984 aaKnown RBP18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 MFSD7Q6UXD7 560 aa18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 RHOT1Q8IXI2 618 aa18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 ATG4CQ96DT6 458 aa18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 DEFB129Q9H1M3 183 aa18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 C12orf65Q9H3J6 166 aaKnown RBP18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 AVENQ9NQS1 362 aaPredicted RBP18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 ANKEF1Q9NU02 776 aa18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 COL2A1P02458 1487 aaPredicted RBP18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 CFAP73A6NFT4 308 aa18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 ANKMY2Q8IV38 441 aa18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 CCDC89Q8N998 374 aa18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 SLC17A8Q8NDX2 589 aa18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 OR5B17Q8NGF7 314 aa18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 KCNV2Q8TDN2 545 aa18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 CNKSR1Q969H4 720 aa18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 KLHL14Q9P2G3 628 aa18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 PRKAG3Q9UGI9 489 aa18.4■□□□□ 0.54
PTP4A3-201ENST00000329397 KAT6AQ92794 2004 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 PECAM1P16284 738 aaPredicted RBP18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 ACO1P21399 889 aaKnown RBP18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 KLRC2P26717 231 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 ARSEP51690 589 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 NOP14P78316 857 aaKnown RBP18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 KRT76Q01546 638 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 GPS1Q13098 491 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 ZNF268Q14587 947 aaPredicted RBP18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 CCNG2Q16589 344 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 C15orf39Q6ZRI6 1047 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 ARHGEF18Q6ZSZ5 1173 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 MAGEC3Q8TD91 643 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 GMLQ99445 158 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 VPS37BQ9H9H4 285 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 NUB1Q9Y5A7 615 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 F8VP50 259 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 DIAPH2O60879 1101 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 EDN1P05305 212 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 KRT15P19012 456 aa18.39■□□□□ 0.53
PTP4A3-201ENST00000329397 SLC1A1P43005 524 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms