RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 MTM1Q13496 603 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 PTK6Q13882 451 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 MIS18BP1Q6P0N0 1132 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 CCDC63Q8NA47 563 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 TBC1D31Q96DN5 1066 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 SGSM3Q96HU1 749 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 KDM4CQ9H3R0 1056 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 AVENQ9NQS1 362 aaPredicted RBP14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 ARHGAP28Q9P2N2 729 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 NUB1Q9Y5A7 615 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 STBD1O95210 358 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 C4BPAP04003 597 aaKnown RBP14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 ETS1P14921 441 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 TGFB2P61812 414 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 NOP14P78316 857 aaKnown RBP14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 DCUN1D2Q6PH85 259 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 FAM47EQ6ZV65 393 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 MON1BQ7L1V2 547 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 EEPD1Q7L9B9 569 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 SERPINB12Q96P63 405 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 TMEM109Q9BVC6 243 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 HAPLN2Q9GZV7 340 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 CHUKO15111 745 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 KRT1P04264 644 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 MYBL1P10243 752 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 CETN2P41208 172 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 PSMC4P43686 418 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 MPP2Q14168 576 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 PSMD6Q15008 389 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 XKR3Q5GH77 459 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 SCARA5Q6ZMJ2 495 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 PIGWQ7Z7B1 504 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 ABRAQ8N0Z2 381 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 CCDC89Q8N998 374 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 RBM15Q96T37 977 aaKnown RBP eCLIP14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 MRPL47Q9HD33 250 aaKnown RBP14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 SAYSD1Q9NPB0 183 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 A1CFQ9NQ94 594 aaKnown RBP14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 NAALADL1Q9UQQ1 740 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 MAFGO15525 162 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 SPAG7O75391 227 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 CETPP11597 493 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 ATP5DP30049 168 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 MAN1A1P33908 653 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 NOMO3P69849 1222 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 SP2Q02086 613 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 CENPCQ03188 943 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 FSTL1Q12841 308 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 RHBDF2Q6PJF5 856 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 VSTM1Q6UX27 236 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 SCYL3Q8IZE3 742 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 GLIS1Q8NBF1 620 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 RDM1Q8NG50 284 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 SLC7A3Q8WY07 619 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 IMPG2Q9BZV3 1241 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 FHDC1Q9C0D6 1143 aaPredicted RBP14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 NKIRAS1Q9NYS0 192 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 TPX2Q9ULW0 747 aaKnown RBP14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 GOLGA8SH3BPF8 625 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 GOLGA8MH3BSY2 632 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 UBOX5O94941 541 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 DYNLT1P63172 113 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 MAP3K10Q02779 954 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 NCOA4Q13772 614 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 TMEM132BQ14DG7 1078 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 MFSD5Q6N075 450 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 CCDC77Q9BR77 488 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 ZNF302Q9NR11 478 aa14.9□□□□□ -0.02
ATP2C1-201ENST00000328560 ZC3H11AO75152 810 aaKnown RBP eCLIP14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 GLRA2P23416 452 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 OSTNP61366 133 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 XRRA1Q6P2D8 792 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 ANKRD35Q8N283 1001 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 KIAA1586Q9HCI6 787 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 DNPEPQ9ULA0 475 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 RASA4BC9J798 803 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 RASA4O43374 803 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 SNX3O60493 162 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 CYP1A1P04798 512 aaPredicted RBP14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 CNTN2Q02246 1040 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 GHRHRQ02643 423 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 LACTB2Q53H82 288 aaPredicted RBP14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 ABHD15Q6UXT9 468 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 MCEEQ96PE7 176 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 TGS1Q96RS0 853 aaKnown RBP14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 SUPT20HL2P0C7V6 817 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 ACO1P21399 889 aaKnown RBP14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 NFX1Q12986 1120 aaKnown RBP14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 SUPT20HL1Q3ZLR7 823 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 ANGEL2Q5VTE6 544 aaKnown RBP14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 CRELD2Q6UXH1 353 aaPredicted RBP14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 C15orf39Q6ZRI6 1047 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 ZNF677Q86XU0 584 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 FEZF2Q8TBJ5 459 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 TEX13BQ9BXU2 312 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 C10orf88Q9H8K7 445 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 VPS37BQ9H9H4 285 aa14.89□□□□□ -0.03
ATP2C1-201ENST00000328560 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.89□□□□□ -0.031e-6■■□□□ 13
ATP2C1-201ENST00000328560 USP15Q9Y4E8 981 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms