RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ANPEPP15144 967 aa13.52□□□□□ -0.25
CCDC60-201ENST00000327554 SCNN1BP51168 640 aa13.52□□□□□ -0.25
CCDC60-201ENST00000327554 ARHGAP4P98171 946 aa13.52□□□□□ -0.25
CCDC60-201ENST00000327554 DSG1Q02413 1049 aa13.52□□□□□ -0.25
CCDC60-201ENST00000327554 ITPK1Q13572 414 aa13.52□□□□□ -0.25
CCDC60-201ENST00000327554 MARK2Q7KZI7 788 aaKnown RBP13.52□□□□□ -0.25
CCDC60-201ENST00000327554 SLC47A2Q86VL8 602 aa13.52□□□□□ -0.25
CCDC60-201ENST00000327554 FAM71AQ8IYT1 594 aa13.52□□□□□ -0.25
CCDC60-201ENST00000327554 SYCP3Q8IZU3 236 aa13.52□□□□□ -0.25
CCDC60-201ENST00000327554 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.52□□□□□ -0.25
CCDC60-201ENST00000327554 RDH13Q8NBN7 331 aa13.52□□□□□ -0.25
CCDC60-201ENST00000327554 STKLD1Q8NE28 680 aa13.52□□□□□ -0.25
CCDC60-201ENST00000327554 ADAM33Q9BZ11 813 aa13.52□□□□□ -0.25
CCDC60-201ENST00000327554 GALNT8Q9NY28 637 aa13.52□□□□□ -0.25
CCDC60-201ENST00000327554 VAV3Q9UKW4 847 aa13.52□□□□□ -0.25
CCDC60-201ENST00000327554 WDR91A4D1P6 747 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 PIK3CDO00329 1044 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 CYP26A1O43174 497 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 RNASEH1O60930 286 aaKnown RBP13.51□□□□□ -0.25
CCDC60-201ENST00000327554 AKR1B1P15121 316 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 CRABP2P29373 138 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 INHBCP55103 352 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 CDK16Q00536 496 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 PPP3CAQ08209 521 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 P3H1Q32P28 736 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 Q4G0T1 1027 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 C1orf186Q6ZWK4 172 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 ZNF720Q7Z2F6 126 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 DDX27Q96GQ7 796 aaKnown RBP13.51□□□□□ -0.25
CCDC60-201ENST00000327554 POLR3CQ9BUI4 534 aaPredicted RBP13.51□□□□□ -0.25
CCDC60-201ENST00000327554 SSU72Q9NP77 194 aaKnown RBP13.51□□□□□ -0.25
CCDC60-201ENST00000327554 IL1RAPL1Q9NZN1 696 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 ZNF652Q9Y2D9 606 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 F8W8V4 182 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 ESRRAP11474 423 aaPredicted RBP13.51□□□□□ -0.25
CCDC60-201ENST00000327554 KRT4P19013 534 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 PGM1P36871 562 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 RASA3Q14644 834 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 CCNG2Q16589 344 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 SLC10A5Q5PT55 438 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 RFX8Q6ZV50 586 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 TTC7BQ86TV6 843 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 PLEKHG4BQ96PX9 1271 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 EIF2AK1Q9BQI3 630 aaKnown RBP13.51□□□□□ -0.25
CCDC60-201ENST00000327554 TMEM120AQ9BXJ8 343 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 HEMGNQ9BXL5 484 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 TRIM55Q9BYV6 548 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 OSBPL8Q9BZF1 889 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 PARVGQ9HBI0 331 aa13.51□□□□□ -0.25
CCDC60-201ENST00000327554 RBBP6Q7Z6E9 1792 aaKnown RBP13.5□□□□□ -0.25
CCDC60-201ENST00000327554 FAM86B1E9PN63 330 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 ZBED4O75132 1171 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 FAM86B2P0C5J1 330 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 PABPC4LP0CB38 370 aaKnown RBP13.5□□□□□ -0.25
CCDC60-201ENST00000327554 RALAP11233 206 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 ADRA2BP18089 450 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 ARFIP2P53365 341 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 CDC16Q13042 620 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 RASA2Q15283 850 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 HP1BP3Q5SSJ5 553 aaPredicted RBP13.5□□□□□ -0.25
CCDC60-201ENST00000327554 CEP128Q6ZU80 1094 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 SLC9A9Q8IVB4 645 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 NAT14Q8WUY8 206 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 MRRFQ96E11 262 aaKnown RBP13.5□□□□□ -0.25
CCDC60-201ENST00000327554 KREMEN1Q96MU8 473 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 OLFM3Q96PB7 478 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 FNBP1Q96RU3 617 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 IWS1Q96ST2 819 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 ANAPC7Q9UJX3 599 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 TTC36A6NLP5 189 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 MEIS2O14770 477 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 MAGEC1O60732 1142 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 FDX1P10109 184 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 CCNFP41002 786 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 RHBDL3P58872 404 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 C1orf220Q5T0J3 134 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 KCTD1Q719H9 257 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 BRINP3Q76B58 766 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 LRRC6Q86X45 466 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 MYLK4Q86YV6 388 aaPredicted RBP13.5□□□□□ -0.25
CCDC60-201ENST00000327554 SMC1BQ8NDV3 1235 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 SPIRE2Q8WWL2 714 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 FAM161BQ96MY7 647 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 PHACTR1Q9C0D0 580 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 C12orf65Q9H3J6 166 aaKnown RBP13.5□□□□□ -0.25
CCDC60-201ENST00000327554 PSMC3IPQ9P2W1 217 aaPredicted RBP13.5□□□□□ -0.25
CCDC60-201ENST00000327554 SLC24A2Q9UI40 661 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 STK24Q9Y6E0 443 aa13.5□□□□□ -0.25
CCDC60-201ENST00000327554 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.5□□□□□ -0.25
CCDC60-201ENST00000327554 FAM163BP0C2L3 166 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 MAPK4P31152 587 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 GRIA2P42262 883 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 MAGEA8P43361 318 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 GCLMP48507 274 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 USP46P62068 366 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 FAM91A1Q658Y4 838 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 CCDC62Q6P9F0 684 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 DPP8Q6V1X1 898 aaPredicted RBP13.49□□□□□ -0.25
CCDC60-201ENST00000327554 CAPN12Q6ZSI9 719 aa13.49□□□□□ -0.25
CCDC60-201ENST00000327554 SLC51AQ86UW1 340 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms