RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 TCF4P15884 667 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 DSG3P32926 999 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 HSD17B4P51659 736 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 MPP2Q14168 576 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 FASTKD3Q14CZ7 662 aaKnown RBP13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 CCDC60Q8IWA6 550 aaPredicted RBP13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 GLIS1Q8NBF1 620 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 FLAD1Q8NFF5 587 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 MICAL1Q8TDZ2 1067 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 RMDN2Q96LZ7 410 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 CFAP57Q96MR6 1250 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 TMEM237Q96Q45 408 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 TRABDQ9H4I3 376 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 FBXO40Q9UH90 709 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 IKBKGQ9Y6K9 419 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 A0A1B0GUA9 196 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 PIK3R2O00459 728 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 ZNF536O15090 1300 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 WDR46O15213 610 aaKnown RBP13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 TARSP26639 723 aaKnown RBP13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 GTF2H1P32780 548 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 BASP1P80723 227 aaKnown RBP13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 NFX1Q12986 1120 aaKnown RBP13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 XRCC4Q13426 336 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 SIX1Q15475 284 aaPredicted RBP13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 SPDYE2Q495Y8 402 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 SPDYCQ5MJ68 293 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 SLC39A4Q6P5W5 647 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 VSTM1Q6UX27 236 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 MFSD7Q6UXD7 560 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 PPP1R21Q6ZMI0 780 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 THNSL1Q8IYQ7 743 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 TTLL6Q8N841 843 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 PSPC1Q8WXF1 523 aaKnown RBP13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 FAM81BQ96LP2 452 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 FAM167BQ9BTA0 163 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 CETPP11597 493 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 HADHBP55084 474 aaKnown RBP13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 NCKAP1LP55160 1127 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 COPS2P61201 443 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 ANKEF1Q9NU02 776 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 SLC9A2Q9UBY0 812 aa13.65□□□□□ -0.22
HMGCS1-201ENST00000325110 UTRNP46939 3433 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 FAM47DPA6NHR8 397 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 F8VP50 259 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 WNT10BO00744 389 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 DGAT1O75907 488 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 DNAJC8O75937 253 aaPredicted RBP13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 GHRP10912 638 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 ALDH3A1P30838 453 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 CUL2Q13617 745 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 TDRD10Q5VZ19 366 aaKnown RBP13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 STYK1Q6J9G0 422 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 PIGWQ7Z7B1 504 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 AGAP11Q8TF27 550 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 RSAD2Q8WXG1 361 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 STRA6Q9BX79 667 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 CALN1Q9BXU9 219 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 ATRNL1Q5VV63 1379 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 SKAP2O75563 359 aaPredicted RBP13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 MAPTP10636 758 aaKnown RBP13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 PECAM1P16284 738 aaPredicted RBP13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 SLC1A1P43005 524 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 ACTR2P61160 394 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 NCALDP61601 193 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 OVGP1Q12889 678 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 NCOA4Q13772 614 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 FAM228AQ86W67 206 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 PALM2Q8IXS6 379 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 BBOF1Q8ND07 529 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 CYP26B1Q9NR63 512 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 PICK1Q9NRD5 415 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 GINM1Q9NU53 330 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 PEX10O60683 326 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 NPM3O75607 178 aaKnown RBP13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 ANP32DO95626 131 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 KRT16P08779 473 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 PTGER2P43116 358 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 PTK6Q13882 451 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 EMC2Q15006 297 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 PKN2Q16513 984 aaKnown RBP13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 PREPLQ4J6C6 727 aaPredicted RBP13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 LACTB2Q53H82 288 aaPredicted RBP13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 MIS18BP1Q6P0N0 1132 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 CTAGE3PQ8IX95 158 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 FITM2Q8N6M3 262 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 OR5B17Q8NGF7 314 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 TMC2Q8TDI7 906 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 ZNF516Q92618 1163 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 IVNS1ABPQ9Y6Y0 642 aa13.64□□□□□ -0.23
HMGCS1-201ENST00000325110 ATP8B3O60423 1300 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 DKC1O60832 514 aaKnown RBP eCLIP13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 STAT4Q14765 748 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 GNPTABQ3T906 1256 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 ENOSF1Q7L5Y1 443 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 SAMD7Q7Z3H4 446 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 C12orf56Q8IXR9 622 aa13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 DDX27Q96GQ7 796 aaKnown RBP13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 C12orf65Q9H3J6 166 aaKnown RBP13.63□□□□□ -0.23
HMGCS1-201ENST00000325110 HAO1Q9UJM8 370 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms