RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 NAMPTP43490 491 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 GPC2Q8N158 579 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 C4orf33Q8N1A6 199 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 SENP7Q9BQF6 1050 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 MYO1CO00159 1063 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 PDHXO00330 501 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 SLC12A2P55011 1212 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 SESN3P58005 492 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 EIF3EP60228 445 aaKnown RBP12.5□□□□□ -0.41
DDR1-223ENST00000324771 RBP5P82980 135 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 IL9RQ01113 521 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 HSDL1Q3SXM5 330 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 KIAA1841Q6NSI8 718 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 ATL2Q8NHH9 583 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 RBM15Q96T37 977 aaKnown RBP eCLIP12.5□□□□□ -0.41
DDR1-223ENST00000324771 ZSWIM1Q9BR11 485 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 DCTN4Q9UJW0 460 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 STRIP2Q9ULQ0 834 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 POLIQ9UNA4 740 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 E2F8A0AVK6 867 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 NFKBIEO00221 500 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 APRTP07741 180 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 AKAP5P24588 427 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 HSD17B3P37058 310 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 TNFSF9P41273 254 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 PSMC4P43686 418 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 PPP2R2AP63151 447 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 PLCB4Q15147 1175 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 ICE2Q659A1 982 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 KCNV1Q6PIU1 500 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 C4orf50Q6ZRC1 276 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 METTL23Q86XA0 190 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 TMEM161BQ8NDZ6 487 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 MCUQ8NE86 351 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 KLRG1Q96E93 195 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 SLC13A1Q9BZW2 595 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 GANQ9H2C0 597 aa12.5□□□□□ -0.41
DDR1-223ENST00000324771 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.5□□□□□ -0.41
DDR1-223ENST00000324771 TIMM13Q9Y5L4 95 aaPredicted RBP12.5□□□□□ -0.41
DDR1-223ENST00000324771 COL14A1Q05707 1796 aaKnown RBP12.5□□□□□ -0.41
DDR1-223ENST00000324771 IGLV3-22A0A075B6J6 115 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 PHF2O75151 1096 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 STAG3L1P0CL83 205 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 PYGMP11217 842 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 PPM1FP49593 454 aaPredicted RBP12.49□□□□□ -0.41
DDR1-223ENST00000324771 SEPT6Q14141 434 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 RAPH1Q70E73 1250 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 FEZF2Q8TBJ5 459 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 HASPINQ8TF76 798 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 CARD9Q9H257 536 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 KLHL8Q9P2G9 620 aaPredicted RBP12.49□□□□□ -0.41
DDR1-223ENST00000324771 DIS3Q9Y2L1 958 aaKnown RBP12.49□□□□□ -0.41
DDR1-223ENST00000324771 TROVE2P10155 538 aaKnown RBP eCLIP12.49□□□□□ -0.41
DDR1-223ENST00000324771 ADORA2AP29274 412 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 CLK2P49760 499 aaKnown RBP12.49□□□□□ -0.41
DDR1-223ENST00000324771 ITGA8P53708 1063 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 SESN2P58004 480 aaPredicted RBP12.49□□□□□ -0.41
DDR1-223ENST00000324771 ADCY2Q08462 1091 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 PSMD6Q15008 389 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 HIBCHQ6NVY1 386 aaPredicted RBP12.49□□□□□ -0.41
DDR1-223ENST00000324771 TRIM72Q6ZMU5 477 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 PCGF5Q86SE9 256 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 OR5B17Q8NGF7 314 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 LNX1Q8TBB1 728 aaPredicted RBP12.49□□□□□ -0.41
DDR1-223ENST00000324771 NSMCE1Q8WV22 266 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 PRMT7Q9NVM4 692 aaPredicted RBP12.49□□□□□ -0.41
DDR1-223ENST00000324771 FAM187AA6NFU0 413 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 RBP3P10745 1247 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 CYP2C19P33261 490 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 EIF3BP55884 814 aaKnown RBP12.49□□□□□ -0.41
DDR1-223ENST00000324771 AP1B1Q10567 949 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 NXNQ6DKJ4 435 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 FAM117BQ6P1L5 589 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 RDM1Q8NG50 284 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 ZNF606Q8WXB4 792 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 C17orf75Q9HAS0 396 aa12.49□□□□□ -0.41
DDR1-223ENST00000324771 SLC26A4O43511 780 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 SUN1O94901 812 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 KRT7P08729 469 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 CETPP11597 493 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 GLRA2P23416 452 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 ERVK-9P63128 1117 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 ATP13A4Q4VNC1 1196 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 TBC1D1Q86TI0 1168 aaPredicted RBP12.48□□□□□ -0.41
DDR1-223ENST00000324771 ATP2A3Q93084 1043 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 RAB6BQ9NRW1 208 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 LRRC37A3O60309 1634 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 P4HA2O15460 535 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 B4GALT5O43286 388 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 NOL4O94818 638 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 SRGAP2BP0DMP2 458 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 GARTP22102 1010 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 YY1P25490 414 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 PTGER2P43116 358 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 LAMC2Q13753 1193 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 TFDP2Q14188 446 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 IRF2BP2Q7Z5L9 587 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 PRUNE1Q86TP1 453 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 RNF139Q8WU17 664 aa12.48□□□□□ -0.41
DDR1-223ENST00000324771 BSNDQ8WZ55 320 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms