RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 GRID1Q9ULK0 1009 aa13.21□□□□□ -0.29
FN1-201ENST00000323926 TJAP1Q5JTD0 557 aa13.21□□□□□ -0.3
FN1-201ENST00000323926 SCARA5Q6ZMJ2 495 aa13.21□□□□□ -0.3
FN1-201ENST00000323926 DCP1BQ8IZD4 617 aaKnown RBP13.21□□□□□ -0.3
FN1-201ENST00000323926 ZNF280CQ8ND82 737 aa13.21□□□□□ -0.3
FN1-201ENST00000323926 FAM49AQ9H0Q0 323 aaPredicted RBP13.21□□□□□ -0.3
FN1-201ENST00000323926 PEX19P40855 299 aa13.21□□□□□ -0.3
FN1-201ENST00000323926 GLB1LQ6UWU2 654 aa13.21□□□□□ -0.3
FN1-201ENST00000323926 CYFIP1Q7L576 1253 aa13.21□□□□□ -0.3
FN1-201ENST00000323926 FAM213AQ9BRX8 229 aa13.21□□□□□ -0.3
FN1-201ENST00000323926 SCN3BQ9NY72 215 aa13.21□□□□□ -0.3
FN1-201ENST00000323926 F9P00740 461 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 STIP1P31948 543 aaKnown RBP13.2□□□□□ -0.3
FN1-201ENST00000323926 SH3RF3Q8TEJ3 882 aaPredicted RBP13.2□□□□□ -0.3
FN1-201ENST00000323926 TBC1D12O60347 775 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 HOXA13P31271 388 aaPredicted RBP13.2□□□□□ -0.3
FN1-201ENST00000323926 SOX6P35712 828 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 HIST2H2ACQ16777 129 aaPredicted RBP13.2□□□□□ -0.3
FN1-201ENST00000323926 HIST2H2AA3Q6FI13 130 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 RAET1EQ8TD07 263 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 LBHD1Q9BQE6 289 aaPredicted RBP13.2□□□□□ -0.3
FN1-201ENST00000323926 RANBP17Q9H2T7 1088 aaKnown RBP13.2□□□□□ -0.3
FN1-201ENST00000323926 NDFIP2Q9NV92 336 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 AAR2Q9Y312 384 aaKnown RBP13.2□□□□□ -0.3
FN1-201ENST00000323926 JCADQ9P266 1359 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 SHROOM3Q8TF72 1996 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 ODC1P11926 461 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 GPSM2P81274 684 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 MRPS25P82663 173 aaKnown RBP13.2□□□□□ -0.3
FN1-201ENST00000323926 LRRC43Q8N309 656 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 GABBR1Q9UBS5 961 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 MON2Q7Z3U7 1717 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 F5H6K3 240 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 ZNF200P98182 395 aaPredicted RBP13.2□□□□□ -0.3
FN1-201ENST00000323926 KLRC3Q07444 240 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 LBRQ14739 615 aaKnown RBP13.2□□□□□ -0.3
FN1-201ENST00000323926 STYK1Q6J9G0 422 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 PLEKHM3Q6ZWE6 761 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 PLEKHA8Q96JA3 519 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 H2AFY2Q9P0M6 372 aaPredicted RBP13.2□□□□□ -0.3
FN1-201ENST00000323926 PTPRUQ92729 1446 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 GRIK1P39086 918 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 NSUN2Q08J23 767 aaKnown RBP eCLIP13.2□□□□□ -0.3
FN1-201ENST00000323926 CDC26Q8NHZ8 85 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 PDCD6IPQ8WUM4 868 aaKnown RBP13.2□□□□□ -0.3
FN1-201ENST00000323926 EVA1BQ9NVM1 165 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 SUFUQ9UMX1 484 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 EMSYQ7Z589 1322 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 TIMM44O43615 452 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 EXTL3O43909 919 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 STAG3L1P0CL83 205 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 STX5Q13190 355 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 AGAP9Q5VTM2 703 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 STARD8Q92502 1023 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 AGPAT1Q99943 283 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 PNPLA6Q8IY17 1366 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 KNDC1Q76NI1 1749 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 FXR2P51116 673 aaKnown RBP eCLIP13.2□□□□□ -0.3
FN1-201ENST00000323926 POLD3Q15054 466 aaPredicted RBP13.2□□□□□ -0.3
FN1-201ENST00000323926 THEMIS2Q5TEJ8 643 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 PIGOQ8TEQ8 1089 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 BSNDQ8WZ55 320 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 GDAQ9Y2T3 454 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 RAD54BQ9Y620 910 aa13.2□□□□□ -0.3
FN1-201ENST00000323926 PRPF4O43172 522 aaKnown RBP eCLIP13.19□□□□□ -0.3
FN1-201ENST00000323926 HBP1O60381 514 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 TADA2AO75478 443 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 GH1P01241 217 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 KCNA1Q09470 495 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 SFR1Q86XK3 245 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 ANKRD13CQ8N6S4 541 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 THOC1Q96FV9 657 aaKnown RBP13.19□□□□□ -0.3
FN1-201ENST00000323926 SERPINB12Q96P63 405 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 AP1M1Q9BXS5 423 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 ICE1Q9Y2F5 2266 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 C2orf81A6NN90 581 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 SLC9A1P19634 815 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 GCLMP48507 274 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 KLC1Q07866 573 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 HAUS6Q7Z4H7 955 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 THNSL1Q8IYQ7 743 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 UBE2OQ9C0C9 1292 aaKnown RBP13.19□□□□□ -0.3
FN1-201ENST00000323926 VPS11Q9H270 941 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 ZNRF3Q9ULT6 936 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 TMCO1Q9UM00 188 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 A8MXQ7 604 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 APRTP07741 180 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 SLC16A2P36021 539 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 PDK2Q15119 407 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 TMEM237Q96Q45 408 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 TSEN34Q9BSV6 310 aaKnown RBP13.19□□□□□ -0.3
FN1-201ENST00000323926 RRAGDQ9NQL2 400 aaPredicted RBP13.19□□□□□ -0.3
FN1-201ENST00000323926 RGL1Q9NZL6 768 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 IPPQ9Y573 584 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 FMO5P49326 533 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 STAT5BP51692 787 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 PDIA2Q13087 525 aaKnown RBP13.19□□□□□ -0.3
FN1-201ENST00000323926 MICALL2Q8IY33 904 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 UNC45AQ9H3U1 944 aa13.19□□□□□ -0.3
FN1-201ENST00000323926 DHX35Q9H5Z1 703 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms