RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 RAB6BQ9NRW1 208 aa11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 SLC4A7Q9Y6M7 1214 aa11.46□□□□□ -0.58
SNRNP200-201ENST00000323853 SMAPO00193 183 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 NR3C2P08235 984 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 GTF2H1P32780 548 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 KDM7AQ6ZMT4 941 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 TRPM8Q7Z2W7 1104 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 DDX42Q86XP3 938 aaKnown RBP eCLIP11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 ZNF710Q8N1W2 664 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 FEZF2Q8TBJ5 459 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 FAM151AQ8WW52 585 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 C9orf72Q96LT7 481 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 ADAM33Q9BZ11 813 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 MAP3K20Q9NYL2 800 aaKnown RBP11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 PAK5Q9P286 719 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 RNF103-CHMP3A0A140T963 221 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 TBCCQ15814 346 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 CNPY4Q8N129 248 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 ANKEF1Q9NU02 776 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 CHMP2BQ9UQN3 213 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 SNX9Q9Y5X1 595 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 TMEM120BA0PK00 339 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 UBE2Q2LH0YL09 131 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 SPAG6O75602 509 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 SERPINB4P48594 390 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 LBRQ14739 615 aaKnown RBP11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 SEPT1Q8WYJ6 367 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 ZNF212Q9UDV6 495 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 TBX20Q9UMR3 447 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 MTO1Q9Y2Z2 717 aaKnown RBP11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 PSTPIP1O43586 416 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 APRTP07741 180 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 C16orf89Q6UX73 402 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 BARGINQ6ZT62 677 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 PPIL6Q8IXY8 311 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 OR6P1Q8NGX9 317 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 PI4K2AQ9BTU6 479 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 KCNH7Q9NS40 1196 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 NDFIP2Q9NV92 336 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 RASSF10A6NK89 507 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 GH1P01241 217 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 GPAT2Q6NUI2 795 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 ATPAF2Q8N5M1 289 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 PBXIP1Q96AQ6 731 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 FUCA2Q9BTY2 467 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 EHD2Q9NZN4 543 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 AGLP35573 1532 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 C3orf70A6NLC5 250 aaPredicted RBP11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 CPB1P15086 417 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 ACTR2P61160 394 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 GRAMD4Q6IC98 578 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 KDELC2Q7Z4H8 507 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 COL23A1Q86Y22 540 aaPredicted RBP11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 KRT35Q92764 455 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 ZSWIM1Q9BR11 485 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 RSAD1Q9HA92 442 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 AGPAT3Q9NRZ7 376 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 NSMCE4AQ9NXX6 385 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 RNF181Q9P0P0 153 aa11.45□□□□□ -0.58
SNRNP200-201ENST00000323853 WEE2P0C1S8 567 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 IL10P22301 178 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 PPP4CP60510 307 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 TROAPQ12815 778 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 LVRNQ6Q4G3 990 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 TEX9Q8N6V9 391 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 IL17RAQ96F46 866 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 AGBL1Q96MI9 1066 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 L2HGDHQ9H9P8 463 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 POLIQ9UNA4 740 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 BRD2P25440 801 aaKnown RBP11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 GEMIN4P57678 1058 aaKnown RBP11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 STYK1Q6J9G0 422 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 RDM1Q8NG50 284 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 GANCQ8TET4 914 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 WARS2Q9UGM6 360 aaKnown RBP11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 MED24O75448 989 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 MYL2P10916 166 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 CYP4A22Q5TCH4 519 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 TSPAN17Q96FV3 270 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 ZBTB7AO95365 584 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 SGPL1O95470 568 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 Q4G0T1 1027 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 SEMA6BQ9H3T3 888 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 MANSC1Q9H8J5 431 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 AFF4Q9UHB7 1163 aaKnown RBP11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 ARHGEF28Q8N1W1 1705 aaKnown RBP11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 CYP11B2P19099 503 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 ACADSBP45954 432 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 FNTAP49354 379 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 XRRA1Q6P2D8 792 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 C4orf22Q6V702 233 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 RMDN1Q96DB5 314 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 SERPINB12Q96P63 405 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 ARHGAP10A1A4S6 786 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 NEMP1O14524 444 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 MYO1DO94832 1006 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 CD4P01730 458 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 IRAK1P51617 712 aa11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 MKRN4PQ13434 485 aaPredicted RBP11.44□□□□□ -0.58
SNRNP200-201ENST00000323853 INPP5AQ14642 412 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms