RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ITGB3P05106 788 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 TCF7P36402 384 aaPredicted RBP17.37■□□□□ 0.37
CLIP4-201ENST00000320081 PAN2Q504Q3 1202 aaKnown RBP17.37■□□□□ 0.37
CLIP4-201ENST00000320081 EFCAB12Q6NXP0 572 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 LCA5Q86VQ0 697 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 SYTL5Q8TDW5 730 aaPredicted RBP17.37■□□□□ 0.37
CLIP4-201ENST00000320081 NUDCD1Q96RS6 583 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 STRIP2Q9ULQ0 834 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 KRT38O76015 456 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 VCAM1P19320 739 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 ALDH18A1P54886 795 aaKnown RBP17.37■□□□□ 0.37
CLIP4-201ENST00000320081 TMEM259Q4ZIN3 620 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 LRRC55Q6ZSA7 311 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 RPAINQ86UA6 219 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 ZNF384Q8TF68 577 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 PRPF31Q8WWY3 499 aaKnown RBP17.37■□□□□ 0.37
CLIP4-201ENST00000320081 METTL5Q9NRN9 209 aaKnown RBP17.37■□□□□ 0.37
CLIP4-201ENST00000320081 GON4LQ3T8J9 2241 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 EIF3DO15371 548 aaKnown RBP eCLIP17.37■□□□□ 0.37
CLIP4-201ENST00000320081 FAM107AO95990 144 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 OCRLQ01968 901 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 MROH9Q5TGP6 573 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 C1orf146Q5VVC0 180 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 WDR75Q8IWA0 830 aaKnown RBP17.37■□□□□ 0.37
CLIP4-201ENST00000320081 OR6P1Q8NGX9 317 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 PWWP2AQ96N64 755 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 PDCD2LQ9BRP1 358 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 CYP26B1Q9NR63 512 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 PCMTD2Q9NV79 361 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 SAE1Q9UBE0 346 aaPredicted RBP17.37■□□□□ 0.37
CLIP4-201ENST00000320081 TMX2Q9Y320 296 aa17.37■□□□□ 0.37
CLIP4-201ENST00000320081 NPTXRO95502 500 aa17.36■□□□□ 0.37
CLIP4-201ENST00000320081 ICAM1P05362 532 aa17.36■□□□□ 0.37
CLIP4-201ENST00000320081 ENO1P06733 434 aaKnown RBP17.36■□□□□ 0.37
CLIP4-201ENST00000320081 CDR2Q01850 454 aa17.36■□□□□ 0.37
CLIP4-201ENST00000320081 PPP3CAQ08209 521 aa17.36■□□□□ 0.37
CLIP4-201ENST00000320081 CDC26Q8NHZ8 85 aa17.36■□□□□ 0.37
CLIP4-201ENST00000320081 DNAJC19Q96DA6 116 aa17.36■□□□□ 0.37
CLIP4-201ENST00000320081 PGBD4Q96DM1 585 aa17.36■□□□□ 0.37
CLIP4-201ENST00000320081 FAM167AQ96KS9 214 aa17.36■□□□□ 0.37
CLIP4-201ENST00000320081 PABPC3Q9H361 631 aaKnown RBP17.36■□□□□ 0.37
CLIP4-201ENST00000320081 GTF3C4Q9UKN8 822 aa17.36■□□□□ 0.37
CLIP4-201ENST00000320081 SDK1Q7Z5N4 2213 aa17.36■□□□□ 0.37
CLIP4-201ENST00000320081 CNTN2Q02246 1040 aa17.36■□□□□ 0.37
CLIP4-201ENST00000320081 MUM1L1Q5H9M0 696 aa17.36■□□□□ 0.37
CLIP4-201ENST00000320081 CPSF2Q9P2I0 782 aaKnown RBP17.36■□□□□ 0.37
CLIP4-201ENST00000320081 XPO7Q9UIA9 1087 aaKnown RBP17.36■□□□□ 0.37
CLIP4-201ENST00000320081 CDH8P55286 799 aa17.36■□□□□ 0.37
CLIP4-201ENST00000320081 COBLL1Q53SF7 1204 aa17.36■□□□□ 0.37
CLIP4-201ENST00000320081 CEP41Q9BYV8 373 aa17.36■□□□□ 0.37
CLIP4-201ENST00000320081 CDC42EP4Q9H3Q1 356 aaKnown RBP17.36■□□□□ 0.37
CLIP4-201ENST00000320081 FAM198AQ9UFP1 575 aa17.36■□□□□ 0.37
CLIP4-201ENST00000320081 FAM237AA0A1B0GTK4 181 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 MEIS2O14770 477 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 PEX10O60683 326 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 HOXA7P31268 230 aaPredicted RBP17.35■□□□□ 0.37
CLIP4-201ENST00000320081 MYL6P60660 151 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 PRPSAP1Q14558 356 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 FAM182AQ5T1J6 154 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 TTC13Q8NBP0 860 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.35■□□□□ 0.37
CLIP4-201ENST00000320081 IL31RAQ8NI17 732 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 GABPB2Q8TAK5 448 aaPredicted RBP17.35■□□□□ 0.37
CLIP4-201ENST00000320081 LRRN4Q8WUT4 740 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 GTSE1Q9NYZ3 720 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 RAB21Q9UL25 225 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 CAMTA1Q9Y6Y1 1673 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 AGTP01019 485 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 RFX1P22670 979 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 EP400NLQ6ZTU2 488 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 ENOSF1Q7L5Y1 443 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 ACAP3Q96P50 834 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 SARS2Q9NP81 518 aaKnown RBP17.35■□□□□ 0.37
CLIP4-201ENST00000320081 ANLNQ9NQW6 1124 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.35■□□□□ 0.37
CLIP4-201ENST00000320081 FAM8A1Q9UBU6 413 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 CLGNO14967 610 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 TRPM8Q7Z2W7 1104 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 SYN2Q92777 582 aaPredicted RBP17.35■□□□□ 0.37
CLIP4-201ENST00000320081 DDX27Q96GQ7 796 aaKnown RBP17.35■□□□□ 0.37
CLIP4-201ENST00000320081 CLMNQ96JQ2 1002 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 CALR3Q96L12 384 aaKnown RBP17.35■□□□□ 0.37
CLIP4-201ENST00000320081 ZC3H7BQ9UGR2 993 aaKnown RBP17.35■□□□□ 0.37
CLIP4-201ENST00000320081 USP15Q9Y4E8 981 aaPredicted RBP17.35■□□□□ 0.37
CLIP4-201ENST00000320081 ZNF263O14978 683 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 ART3Q13508 389 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 ATF7IP2Q5U623 682 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 KIAA1841Q6NSI8 718 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 LVRNQ6Q4G3 990 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 EXOC8Q8IYI6 725 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 SLC4A7Q9Y6M7 1214 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 IGSF9BQ9UPX0 1349 aa17.35■□□□□ 0.37
CLIP4-201ENST00000320081 NOL3O60936 208 aaKnown RBP17.34■□□□□ 0.37
CLIP4-201ENST00000320081 DCTN3O75935 186 aa17.34■□□□□ 0.37
CLIP4-201ENST00000320081 FBXO16Q8IX29 292 aaPredicted RBP17.34■□□□□ 0.37
CLIP4-201ENST00000320081 ALKBH8Q96BT7 664 aaKnown RBP17.34■□□□□ 0.37
CLIP4-201ENST00000320081 SPON2Q9BUD6 331 aa17.34■□□□□ 0.37
CLIP4-201ENST00000320081 VTNP04004 478 aa17.34■□□□□ 0.37
CLIP4-201ENST00000320081 KRT4P19013 534 aa17.34■□□□□ 0.37
CLIP4-201ENST00000320081 ITIH2P19823 946 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms