RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 MGAT3Q09327 533 aa13.55□□□□□ -0.24
PTPN6-201ENST00000318974 RPS6KA1Q15418 735 aa13.55□□□□□ -0.24
PTPN6-201ENST00000318974 SLC10A6Q3KNW5 377 aa13.55□□□□□ -0.24
PTPN6-201ENST00000318974 EMBQ6PCB8 327 aa13.55□□□□□ -0.24
PTPN6-201ENST00000318974 EFCAB13Q8IY85 973 aa13.55□□□□□ -0.24
PTPN6-201ENST00000318974 LRRC57Q8N9N7 239 aa13.55□□□□□ -0.24
PTPN6-201ENST00000318974 TATDN2Q93075 761 aa13.55□□□□□ -0.24
PTPN6-201ENST00000318974 MS4A14Q96JA4 679 aa13.55□□□□□ -0.24
PTPN6-201ENST00000318974 PI4K2AQ9BTU6 479 aa13.55□□□□□ -0.24
PTPN6-201ENST00000318974 MTMR12Q9C0I1 747 aa13.55□□□□□ -0.24
PTPN6-201ENST00000318974 C1orf112Q9NSG2 853 aa13.55□□□□□ -0.24
PTPN6-201ENST00000318974 SMARCAL1Q9NZC9 954 aa13.55□□□□□ -0.24
PTPN6-201ENST00000318974 NOC2LQ9Y3T9 749 aaKnown RBP13.55□□□□□ -0.24
PTPN6-201ENST00000318974 EVI5O60447 810 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 TNNC2P02585 160 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 THPOP40225 353 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 NCOA4Q13772 614 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 TAF3Q5VWG9 929 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 ENOSF1Q7L5Y1 443 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 GSPT2Q8IYD1 628 aaKnown RBP13.54□□□□□ -0.24
PTPN6-201ENST00000318974 KAT5Q92993 513 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 PBKQ96KB5 322 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 KREMEN1Q96MU8 473 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 EIF2AQ9BY44 585 aaKnown RBP13.54□□□□□ -0.24
PTPN6-201ENST00000318974 TRIM6Q9C030 488 aaPredicted RBP13.54□□□□□ -0.24
PTPN6-201ENST00000318974 SENP6Q9GZR1 1112 aaPredicted RBP13.54□□□□□ -0.24
PTPN6-201ENST00000318974 PHF24Q9UPV7 400 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 ERICH4A6NGS2 130 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 FOXN3O00409 490 aaPredicted RBP13.54□□□□□ -0.24
PTPN6-201ENST00000318974 DDX3XO00571 662 aaKnown RBP eCLIP13.54□□□□□ -0.24
PTPN6-201ENST00000318974 RPS6KA5O75582 802 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 KIF4AO95239 1232 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 CHRNA1P02708 482 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 NOP2P46087 812 aaKnown RBP13.54□□□□□ -0.24
PTPN6-201ENST00000318974 GYS2P54840 703 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 GCNT1Q02742 428 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 CD302Q8IX05 232 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 SYCE1Q8N0S2 351 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 SLC43A3Q8NBI5 491 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 SLC30A5Q8TAD4 765 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 IMPG2Q9BZV3 1241 aa13.54□□□□□ -0.24
PTPN6-201ENST00000318974 PAK6Q9NQU5 681 aaPredicted RBP13.54□□□□□ -0.24
PTPN6-201ENST00000318974 TRMT13Q9NUP7 481 aaKnown RBP13.54□□□□□ -0.24
PTPN6-201ENST00000318974 MEFVO15553 781 aaPredicted RBP13.53□□□□□ -0.24
PTPN6-201ENST00000318974 SYF2O95926 243 aaKnown RBP13.53□□□□□ -0.24
PTPN6-201ENST00000318974 NFICP08651 508 aa13.53□□□□□ -0.24
PTPN6-201ENST00000318974 SLC7A5Q01650 507 aa13.53□□□□□ -0.24
PTPN6-201ENST00000318974 TRPC3Q13507 836 aa13.53□□□□□ -0.24
PTPN6-201ENST00000318974 MTFR1Q15390 333 aa13.53□□□□□ -0.24
PTPN6-201ENST00000318974 JADE1Q6IE81 842 aa13.53□□□□□ -0.24
PTPN6-201ENST00000318974 SLFN11Q7Z7L1 901 aa13.53□□□□□ -0.24
PTPN6-201ENST00000318974 IFT20Q8IY31 132 aa13.53□□□□□ -0.24
PTPN6-201ENST00000318974 USP38Q8NB14 1042 aa13.53□□□□□ -0.24
PTPN6-201ENST00000318974 TPCN2Q8NHX9 752 aa13.53□□□□□ -0.24
PTPN6-201ENST00000318974 CAVIN3Q969G5 261 aa13.53□□□□□ -0.24
PTPN6-201ENST00000318974 SNTG2Q9NY99 539 aa13.53□□□□□ -0.24
PTPN6-201ENST00000318974 DNM1LO00429 736 aa13.52□□□□□ -0.24
PTPN6-201ENST00000318974 RNF40O75150 1001 aa13.52□□□□□ -0.24
PTPN6-201ENST00000318974 CLSTN1O94985 981 aa13.52□□□□□ -0.24
PTPN6-201ENST00000318974 CST3P01034 146 aaPredicted RBP13.52□□□□□ -0.24
PTPN6-201ENST00000318974 YARSP54577 528 aaKnown RBP13.52□□□□□ -0.24
PTPN6-201ENST00000318974 NNTQ13423 1086 aa13.52□□□□□ -0.24
PTPN6-201ENST00000318974 NT5DC4Q86YG4 428 aa13.52□□□□□ -0.24
PTPN6-201ENST00000318974 SHC3Q92529 594 aa13.52□□□□□ -0.24
PTPN6-201ENST00000318974 DHX38Q92620 1227 aaKnown RBP13.52□□□□□ -0.24
PTPN6-201ENST00000318974 ELMO3Q96BJ8 720 aa13.52□□□□□ -0.24
PTPN6-201ENST00000318974 DEFB118Q96PH6 123 aa13.52□□□□□ -0.24
PTPN6-201ENST00000318974 PLEKHA5Q9HAU0 1116 aa13.52□□□□□ -0.24
PTPN6-201ENST00000318974 PACSIN2Q9UNF0 486 aaPredicted RBP13.52□□□□□ -0.24
PTPN6-201ENST00000318974 ST3GAL5Q9UNP4 418 aa13.52□□□□□ -0.24
PTPN6-201ENST00000318974 GOLGA6BA6NDN3 693 aa13.52□□□□□ -0.25
PTPN6-201ENST00000318974 ARVCFO00192 962 aa13.52□□□□□ -0.25
PTPN6-201ENST00000318974 KCNK3O14649 394 aa13.52□□□□□ -0.25
PTPN6-201ENST00000318974 MYCP01106 439 aaPredicted RBP13.52□□□□□ -0.25
PTPN6-201ENST00000318974 CCL5P13501 91 aa13.52□□□□□ -0.25
PTPN6-201ENST00000318974 LMAN1P49257 510 aa13.52□□□□□ -0.25
PTPN6-201ENST00000318974 DNA2P51530 1060 aa13.52□□□□□ -0.25
PTPN6-201ENST00000318974 TNNC1P63316 161 aa13.52□□□□□ -0.25
PTPN6-201ENST00000318974 NOP14P78316 857 aaKnown RBP13.52□□□□□ -0.25
PTPN6-201ENST00000318974 TMEM132DQ14C87 1099 aa13.52□□□□□ -0.25
PTPN6-201ENST00000318974 SGSM1Q2NKQ1 1148 aa13.52□□□□□ -0.25
PTPN6-201ENST00000318974 TRIM71Q2Q1W2 868 aaKnown RBP13.52□□□□□ -0.25
PTPN6-201ENST00000318974 UBXN11Q5T124 520 aa13.52□□□□□ -0.25
PTPN6-201ENST00000318974 SPOPLQ6IQ16 392 aa13.52□□□□□ -0.25
PTPN6-201ENST00000318974 SND1Q7KZF4 910 aaKnown RBP eCLIP13.52□□□□□ -0.25
PTPN6-201ENST00000318974 LNX1Q8TBB1 728 aaPredicted RBP13.52□□□□□ -0.25
PTPN6-201ENST00000318974 ACTRT1Q8TDG2 376 aa13.52□□□□□ -0.25
PTPN6-201ENST00000318974 U2AF1L4Q8WU68 220 aaKnown RBP13.52□□□□□ -0.25
PTPN6-201ENST00000318974 GDAP1L1Q96MZ0 367 aa13.52□□□□□ -0.25
PTPN6-201ENST00000318974 SYT11Q9BT88 431 aa13.52□□□□□ -0.25
PTPN6-201ENST00000318974 RNF208Q9H0X6 261 aa13.52□□□□□ -0.25
PTPN6-201ENST00000318974 NXF3Q9H4D5 531 aaKnown RBP13.52□□□□□ -0.25
PTPN6-201ENST00000318974 GDF3Q9NR23 364 aa13.52□□□□□ -0.25
PTPN6-201ENST00000318974 TMEM59LQ9UK28 342 aa13.52□□□□□ -0.25
PTPN6-201ENST00000318974 C2CD2Q9Y426 696 aa13.52□□□□□ -0.25
PTPN6-201ENST00000318974 GPR182O15218 404 aa13.51□□□□□ -0.25
PTPN6-201ENST00000318974 CAND2O75155 1236 aa13.51□□□□□ -0.25
PTPN6-201ENST00000318974 ASS1P00966 412 aaKnown RBP13.51□□□□□ -0.25
PTPN6-201ENST00000318974 USP8P40818 1118 aa13.51□□□□□ -0.25
PTPN6-201ENST00000318974 NFX1Q12986 1120 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms