RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 MAK16Q9BXY0 300 aaKnown RBP10.23□□□□□ -0.77
PTPRA-202ENST00000318266 OCEL1Q9H607 264 aa10.23□□□□□ -0.77
PTPRA-202ENST00000318266 WRAP73Q9P2S5 460 aaPredicted RBP10.23□□□□□ -0.77
PTPRA-202ENST00000318266 EIF3DO15371 548 aaKnown RBP eCLIP10.22□□□□□ -0.77
PTPRA-202ENST00000318266 HAUS5O94927 633 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 SLITRK3O94933 977 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 TJP3O95049 919 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 IFNB1P01574 187 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 KRT10P13645 584 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 SERPINB3P29508 390 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 TM4SF1P30408 202 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 MXI1P50539 228 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 CACNB3P54284 484 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 PPP2R5CQ13362 524 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 PPFIBP2Q8ND30 876 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 PLEKHO2Q8TD55 490 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 FIZ1Q96SL8 496 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.22□□□□□ -0.774e-6■■■■□ 23.7
PTPRA-202ENST00000318266 GTF3C4Q9UKN8 822 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 NEU2Q9Y3R4 380 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 DAGLAQ9Y4D2 1042 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 IRS2Q9Y4H2 1338 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 UBR3Q6ZT12 1888 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 SIGLEC16A6NMB1 481 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 SORBS3O60504 671 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 BAG2O95816 211 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 CYP11B1P15538 503 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 AMPD1P23109 780 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 LRRC36Q1X8D7 754 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 RINLQ6ZS11 566 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 LRRC6Q86X45 466 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 DENND1AQ8TEH3 1009 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 GRK7Q8WTQ7 553 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 UBE2OQ9C0C9 1292 aaKnown RBP10.22□□□□□ -0.77
PTPRA-202ENST00000318266 ZBTB21Q9ULJ3 1066 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.22□□□□□ -0.77
PTPRA-202ENST00000318266 EP400Q96L91 3159 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 CYP3A7-CYP3A51PA0A087WV96 503 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 GSC2O15499 205 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 MAP3K7O43318 606 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 PSMG1O95456 288 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 ATF7P17544 494 aaPredicted RBP10.22□□□□□ -0.77
PTPRA-202ENST00000318266 CYP3A7P24462 503 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 GSTT1P30711 240 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 GTF2IP78347 998 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 SLC34A1Q06495 639 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 TCP10Q12799 353 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 PDCD2Q16342 344 aaPredicted RBP10.22□□□□□ -0.77
PTPRA-202ENST00000318266 SLC10A5Q5PT55 438 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 ARHGAP22Q7Z5H3 698 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 ANKS1BQ7Z6G8 1248 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 CCDC89Q8N998 374 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 SEMA4DQ92854 862 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 CFAP57Q96MR6 1250 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 FAM161BQ96MY7 647 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 TTC1Q99614 292 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 PI4K2AQ9BTU6 479 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 TOPORSQ9NS56 1045 aaPredicted RBP10.22□□□□□ -0.77
PTPRA-202ENST00000318266 DMAC2Q9NW81 257 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 ZNF148Q9UQR1 794 aa10.22□□□□□ -0.77
PTPRA-202ENST00000318266 NAV1Q8NEY1 1877 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 CCDC22O60826 627 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 CYP1A2P05177 515 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 TROVE2P10155 538 aaKnown RBP eCLIP10.21□□□□□ -0.77
PTPRA-202ENST00000318266 PSMC4P43686 418 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 NOVP48745 357 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 GPSM2P81274 684 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 SLC5A9Q2M3M2 681 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 CTC1Q2NKJ3 1217 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 ATP13A4Q4VNC1 1196 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 SLFN13Q68D06 897 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 ISLR2Q6UXK2 745 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 PASD1Q8IV76 773 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 SLC25A41Q8N5S1 370 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 MAIP1Q8WWC4 291 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 PTPRN2Q92932 1015 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 ACSF2Q96CM8 615 aaPredicted RBP10.21□□□□□ -0.77
PTPRA-202ENST00000318266 BTBD10Q9BSF8 475 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 EURLQ9NYK6 297 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 KANSL3Q9P2N6 904 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 SLC17A7Q9P2U7 560 aa10.21□□□□□ -0.77
PTPRA-202ENST00000318266 RIMBP2O15034 1052 aa10.21□□□□□ -0.78
PTPRA-202ENST00000318266 TCEA3O75764 348 aa10.21□□□□□ -0.78
PTPRA-202ENST00000318266 USP1O94782 785 aa10.21□□□□□ -0.78
PTPRA-202ENST00000318266 CFBP00751 764 aa10.21□□□□□ -0.78
PTPRA-202ENST00000318266 SHMT1P34896 483 aa10.21□□□□□ -0.78
PTPRA-202ENST00000318266 GPS1Q13098 491 aa10.21□□□□□ -0.78
PTPRA-202ENST00000318266 NR1H3Q13133 447 aa10.21□□□□□ -0.78
PTPRA-202ENST00000318266 TBC1D25Q3MII6 688 aa10.21□□□□□ -0.78
PTPRA-202ENST00000318266 SLC45A4Q5BKX6 768 aa10.21□□□□□ -0.78
PTPRA-202ENST00000318266 STXBP4Q6ZWJ1 553 aa10.21□□□□□ -0.78
PTPRA-202ENST00000318266 CLPTM1LQ96KA5 538 aa10.21□□□□□ -0.78
PTPRA-202ENST00000318266 FAM20AQ96MK3 541 aa10.21□□□□□ -0.78
PTPRA-202ENST00000318266 NYXQ9GZU5 481 aa10.21□□□□□ -0.78
PTPRA-202ENST00000318266 C10orf88Q9H8K7 445 aa10.21□□□□□ -0.78
PTPRA-202ENST00000318266 C6orf229H3BNL8 230 aa10.2□□□□□ -0.78
PTPRA-202ENST00000318266 ABLIM1O14639 778 aa10.2□□□□□ -0.78
PTPRA-202ENST00000318266 MAGEB2O15479 319 aa10.2□□□□□ -0.78
PTPRA-202ENST00000318266 LMNAP02545 664 aaKnown RBP10.2□□□□□ -0.78
PTPRA-202ENST00000318266 ESRRAP11474 423 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms