RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 RASA2Q15283 850 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 ALFQ53S48 1182 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 LRRC74BQ6ZQY2 392 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 PACSIN1Q9BY11 444 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 SELENONQ9NZV5 590 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 GTF2A1LQ9UNN4 478 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 TEX14Q8IWB6 1497 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 SLC16A4O15374 487 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 RAD17O75943 681 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 GDF11O95390 407 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 S100A9P06702 114 aaKnown RBP9.13□□□□□ -0.95
USF3-201ENST00000316407 SOAT1P35610 550 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 ALDH6A1Q02252 535 aaKnown RBP9.13□□□□□ -0.95
USF3-201ENST00000316407 TRIQKQ629K1 86 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 P3H2Q8IVL5 708 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 DCLRE1BQ9H816 532 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 RPF1Q9H9Y2 349 aaKnown RBP9.13□□□□□ -0.95
USF3-201ENST00000316407 KCNG1Q9UIX4 513 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 ATP8B3O60423 1300 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 POTECB2RU33 542 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 ITGA8P53708 1063 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 PROSER3Q2NL68 480 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 NINQ8N4C6 2090 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 RAD51BO15315 384 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 CNGA2Q16280 664 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 DOK7Q18PE1 504 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 VN1R5Q7Z5H4 357 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 ZBTB46Q86UZ6 589 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 PROM2Q8N271 834 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 ZNF496Q96IT1 587 aaPredicted RBP9.13□□□□□ -0.95
USF3-201ENST00000316407 FAM210AQ96ND0 272 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 CPVLQ9H3G5 476 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 PRDM5Q9NQX1 630 aaPredicted RBP9.13□□□□□ -0.95
USF3-201ENST00000316407 NMT2O60551 498 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 KLHL41O60662 606 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 LRRC8DQ7L1W4 858 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 RBBP8NLQ8NC74 664 aaPredicted RBP9.13□□□□□ -0.95
USF3-201ENST00000316407 CD274Q9NZQ7 290 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 STAP2Q9UGK3 403 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 PRDM4Q9UKN5 801 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 EMSYQ7Z589 1322 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 IL6P05231 212 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 PERM1Q5SV97 790 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 METTL16Q86W50 562 aaKnown RBP9.13□□□□□ -0.95
USF3-201ENST00000316407 ZNF212Q9UDV6 495 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 CLCA2Q9UQC9 943 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 ZNF233A6NK53 670 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 ABCD1P33897 745 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 DCTN2Q13561 401 aaKnown RBP9.13□□□□□ -0.95
USF3-201ENST00000316407 NRF1Q16656 503 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 USP17L6PQ6QN14 398 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 KDM7AQ6ZMT4 941 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 LRRN4CLQ8ND94 238 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 FAM81AQ8TBF8 368 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 DDI1Q8WTU0 396 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 FAM136AQ96C01 138 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 HEY2Q9UBP5 337 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 E9PBE3 544 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 MYO1DO94832 1006 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 ADORA2BP29275 332 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 HMOX2P30519 316 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 ZNF57Q68EA5 555 aaPredicted RBP9.13□□□□□ -0.95
USF3-201ENST00000316407 RHOT1Q8IXI2 618 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 TRAPPC9Q96Q05 1148 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 SERHL2Q9H4I8 314 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 SERHLQ9NQF3 203 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 ZDHHC9Q9Y397 364 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 RPAP1Q9BWH6 1393 aaPredicted RBP9.13□□□□□ -0.95
USF3-201ENST00000316407 FAM25AB3EWG3 89 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 FAM25CB3EWG5 89 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 FAM25GB3EWG6 89 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 USP17L8P0C7I0 530 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 JAK1P23458 1154 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 AQP5P55064 265 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 CSNK2BP67870 215 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 C1orf131Q8NDD1 294 aaKnown RBP9.13□□□□□ -0.95
USF3-201ENST00000316407 TNIP2Q8NFZ5 429 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 ZFP42Q96MM3 310 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 HPS5Q9UPZ3 1129 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 ABCA5Q8WWZ7 1642 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 STAT3P40763 770 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 KBTBD12Q3ZCT8 623 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 KRT77Q7Z794 578 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 KBTBD2Q8IY47 623 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 PPP2R3CQ969Q6 453 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 C18orf8Q96DM3 657 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 RPAP3Q9H6T3 665 aaPredicted RBP9.13□□□□□ -0.95
USF3-201ENST00000316407 ASNSD1Q9NWL6 643 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 H2AFY2Q9P0M6 372 aaPredicted RBP9.13□□□□□ -0.95
USF3-201ENST00000316407 LOC100506127A0A0U1RQW1 187 aa9.12□□□□□ -0.95
USF3-201ENST00000316407 KPNA4O00629 521 aaPredicted RBP9.12□□□□□ -0.95
USF3-201ENST00000316407 PRPF3O43395 683 aaKnown RBP9.12□□□□□ -0.95
USF3-201ENST00000316407 TBC1D12O60347 775 aa9.12□□□□□ -0.95
USF3-201ENST00000316407 ABCE1P61221 599 aaKnown RBP9.12□□□□□ -0.95
USF3-201ENST00000316407 PCYOX1LQ8NBM8 494 aa9.12□□□□□ -0.95
USF3-201ENST00000316407 SH3KBP1Q96B97 665 aa9.12□□□□□ -0.95
USF3-201ENST00000316407 INTS2Q9H0H0 1204 aaKnown RBP9.12□□□□□ -0.95
USF3-201ENST00000316407 PCDHGB4Q9UN71 923 aa9.12□□□□□ -0.95
USF3-201ENST00000316407 ATP10DQ9P241 1426 aa9.12□□□□□ -0.95
USF3-201ENST00000316407 TRIM49D1C9J1S8 452 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms