RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 DUSP9Q99956 384 aaKnown RBP8.5□□□□□ -1.05
CDC42-201ENST00000315554 HERC2P3Q9BVR0 1158 aa8.5□□□□□ -1.05
CDC42-201ENST00000315554 PRKD2Q9BZL6 878 aa8.5□□□□□ -1.05
CDC42-201ENST00000315554 LMAN2LQ9H0V9 348 aa8.5□□□□□ -1.05
CDC42-201ENST00000315554 ZBP1Q9H171 429 aa8.5□□□□□ -1.05
CDC42-201ENST00000315554 INTS13Q9NVM9 706 aa8.5□□□□□ -1.05
CDC42-201ENST00000315554 AGAP1Q9UPQ3 857 aa8.5□□□□□ -1.05
CDC42-201ENST00000315554 FRMD4BQ9Y2L6 1034 aa8.5□□□□□ -1.05
CDC42-201ENST00000315554 DERAQ9Y315 318 aa8.5□□□□□ -1.05
CDC42-201ENST00000315554 C2CD2Q9Y426 696 aa8.5□□□□□ -1.05
CDC42-201ENST00000315554 NUB1Q9Y5A7 615 aa8.5□□□□□ -1.05
CDC42-201ENST00000315554 PRRC2BQ5JSZ5 2229 aaKnown RBP8.49□□□□□ -1.05
CDC42-201ENST00000315554 CETN3O15182 167 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 SPTLC1O15269 473 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 XPOTO43592 962 aaKnown RBP8.49□□□□□ -1.05
CDC42-201ENST00000315554 ZMYND10O75800 440 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 EFEMP2O95967 443 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 TNNC2P02585 160 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 SOD2P04179 222 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 URODP06132 367 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 CYP3A5P20815 502 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 RPL13P26373 211 aaKnown RBP8.49□□□□□ -1.05
CDC42-201ENST00000315554 TKTP29401 623 aaKnown RBP8.49□□□□□ -1.05
CDC42-201ENST00000315554 LRPAP1P30533 357 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 RPL9P32969 192 aaKnown RBP8.49□□□□□ -1.05
CDC42-201ENST00000315554 NRIP1P48552 1158 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 GLUD2P49448 558 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 UBE3AQ05086 875 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 BFSP1Q12934 665 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 PTPN14Q15678 1187 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 EDRF1Q3B7T1 1238 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 TIGD5Q53EQ6 642 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 KIAA1841Q6NSI8 718 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 TTI2Q6NXR4 508 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 LLGL2Q6P1M3 1020 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 CSGALNACT2Q8N6G5 542 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 MAFAQ8NHW3 353 aaPredicted RBP8.49□□□□□ -1.05
CDC42-201ENST00000315554 CACTINQ8WUQ7 758 aaKnown RBP8.49□□□□□ -1.05
CDC42-201ENST00000315554 RIN2Q8WYP3 895 aaPredicted RBP8.49□□□□□ -1.05
CDC42-201ENST00000315554 ANKRD36BP1Q96IX9 119 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 MED15Q96RN5 788 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 GTPBP4Q9BZE4 634 aaKnown RBP8.49□□□□□ -1.05
CDC42-201ENST00000315554 NSUN3Q9H649 340 aaKnown RBP8.49□□□□□ -1.05
CDC42-201ENST00000315554 PRDM6Q9NQX0 595 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.49□□□□□ -1.052e-8■■■■■ 53.1
CDC42-201ENST00000315554 SIX4Q9UIU6 781 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 LZTS1Q9Y250 596 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 TIMM13Q9Y5L4 95 aaPredicted RBP8.49□□□□□ -1.05
CDC42-201ENST00000315554 ANK1P16157 1881 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 MYO7AQ13402 2215 aa8.49□□□□□ -1.05
CDC42-201ENST00000315554 SF3B1O75533 1304 aaKnown RBP eCLIP8.48□□□□□ -1.051e-7■■■■■ 113.4
CDC42-201ENST00000315554 PDCD11Q14690 1871 aaKnown RBP8.48□□□□□ -1.05
CDC42-201ENST00000315554 C2orf71A6NGG8 1288 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 PIRO00625 290 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 LINC01565O15544 149 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 CTSAP10619 480 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 PSMC2P35998 433 aaKnown RBP8.48□□□□□ -1.05
CDC42-201ENST00000315554 VAMP7P51809 220 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 CDR1P51861 262 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 FKBP3Q00688 224 aaKnown RBP8.48□□□□□ -1.05
CDC42-201ENST00000315554 POU5F1Q01860 360 aaKnown RBP8.48□□□□□ -1.05
CDC42-201ENST00000315554 LRRC63Q05C16 580 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 HYAL1Q12794 435 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 BIRC3Q13489 604 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 MYBPC2Q14324 1141 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 SMC1AQ14683 1233 aaKnown RBP8.48□□□□□ -1.05
CDC42-201ENST00000315554 SURF1Q15526 300 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 NFIL3Q16649 462 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 DUOXA2Q1HG44 320 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 PROX2Q3B8N5 592 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 USP41Q3LFD5 358 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 CCDC40Q4G0X9 1142 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 HSP90AA4PQ58FG1 418 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 C1orf220Q5T0J3 134 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 DSTYKQ6XUX3 929 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 RBM43Q6ZSC3 357 aaKnown RBP8.48□□□□□ -1.05
CDC42-201ENST00000315554 C11orf57Q6ZUT1 292 aaPredicted RBP8.48□□□□□ -1.05
CDC42-201ENST00000315554 TRAPPC11Q7Z392 1133 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 CREBRFQ8IUR6 639 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 WDR49Q8IV35 697 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 RNF168Q8IYW5 571 aaPredicted RBP8.48□□□□□ -1.05
CDC42-201ENST00000315554 MLKLQ8NB16 471 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 PARD3BQ8TEW8 1205 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 TTPALQ9BTX7 342 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 SRRTQ9BXP5 876 aaKnown RBP8.48□□□□□ -1.05
CDC42-201ENST00000315554 TLE6Q9H808 572 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 MRPL17Q9NRX2 175 aaKnown RBP8.48□□□□□ -1.05
CDC42-201ENST00000315554 STXBP5LQ9Y2K9 1186 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 ATG2AQ2TAZ0 1938 aa8.48□□□□□ -1.05
CDC42-201ENST00000315554 CDH23Q9H251 3354 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 ANO9A1A5B4 782 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 BICDL2A1A5D9 508 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 CARNS1A5YM72 827 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 TMEM189-UBE2V1I3L0A0 370 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 ADAM12O43184 909 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 PHACTR2O75167 634 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 LRRN2O75325 713 aa8.47□□□□□ -1.05
CDC42-201ENST00000315554 CST3P01034 146 aaPredicted RBP8.47□□□□□ -1.05
CDC42-201ENST00000315554 CNPP09543 421 aaKnown RBP8.47□□□□□ -1.05
CDC42-201ENST00000315554 EPB41P11171 864 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms