RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 CST5P28325 142 aaPredicted RBP8.38□□□□□ -1.07
CNOT4-201ENST00000315544 CHRNA3P32297 505 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 CDKN2BP42772 138 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 GAD2Q05329 585 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 SLC18A2Q05940 514 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 ZNF792Q3KQV3 632 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 EAPPQ56P03 285 aaPredicted RBP8.38□□□□□ -1.07
CNOT4-201ENST00000315544 EFHC2Q5JST6 749 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 TREML2Q5T2D2 321 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 ALKAL1Q6UXT8 129 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 EPS8L3Q8TE67 593 aaKnown RBP8.38□□□□□ -1.07
CNOT4-201ENST00000315544 NFKBIZQ9BYH8 718 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 WNT8AQ9H1J5 351 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 ABCF3Q9NUQ8 709 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 CHKBQ9Y259 395 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 EFR3BQ9Y2G0 817 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 DENND3A2RUS2 1198 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 PHACTR2O75167 634 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 EIF3JO75822 258 aaKnown RBP8.38□□□□□ -1.07
CNOT4-201ENST00000315544 AGTP01019 485 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 GH2P01242 217 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 CPOXP36551 454 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 NPTX2P47972 431 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 LACTBP83111 547 aaPredicted RBP8.38□□□□□ -1.07
CNOT4-201ENST00000315544 GRIK3Q13003 919 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 CRHR2Q13324 411 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 RAPGEF1Q13905 1077 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 PRR16Q569H4 304 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 CYB5D1Q6P9G0 228 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 TRABD2AQ86V40 505 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 VSIG1Q86XK7 387 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 CBWD2Q8IUF1 395 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 NELFCDQ8IXH7 590 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 BCAS4Q8TDM0 211 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 ATP6V0A4Q9HBG4 840 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 USP29Q9HBJ7 922 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 TMEM8AQ9HCN3 771 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 NINJ2Q9NZG7 142 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 TBC1D7Q9P0N9 293 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 RABGEF1Q9UJ41 708 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 NRCAMQ92823 1304 aa8.38□□□□□ -1.07
CNOT4-201ENST00000315544 SFI1A8K8P3 1242 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 ZNF487B1APH4 448 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 PAPLNO95428 1278 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 CALCAP01258 141 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 EIF3BP55884 814 aaKnown RBP8.37□□□□□ -1.07
CNOT4-201ENST00000315544 SNAPC2Q13487 334 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 LRRC38Q5VT99 294 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 BHLHA9Q7RTU4 235 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 FBXO11Q86XK2 927 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 PRCCQ92733 491 aaPredicted RBP8.37□□□□□ -1.07
CNOT4-201ENST00000315544 VWCEQ96DN2 955 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 AGBL1Q96MI9 1066 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 SERPINB12Q96P63 405 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 C20orf27Q9GZN8 174 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 CDC42EP4Q9H3Q1 356 aaKnown RBP8.37□□□□□ -1.07
CNOT4-201ENST00000315544 KIAA1586Q9HCI6 787 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 FBXO28Q9NVF7 368 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 ZNF219Q9P2Y4 722 aaPredicted RBP8.37□□□□□ -1.07
CNOT4-201ENST00000315544 SEC63Q9UGP8 760 aaKnown RBP8.37□□□□□ -1.07
CNOT4-201ENST00000315544 PNMA2Q9UL42 364 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 SZT2Q5T011 3432 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 TRIM64A6NGJ6 449 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 TRIM64BA6NI03 449 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 GPR25O00155 361 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 LIASO43766 372 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 TTC4O95801 387 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 GARTP22102 1010 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 IL1R2P27930 398 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 HTRA3P83110 453 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 ALCAMQ13740 583 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 PRUNE1Q86TP1 453 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 IGDCC3Q8IVU1 814 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 RHOT2Q8IXI1 618 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 ZCCHC9Q8N567 271 aaKnown RBP8.37□□□□□ -1.07
CNOT4-201ENST00000315544 TAS1R2Q8TE23 839 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 OXNAD1Q96HP4 312 aaPredicted RBP8.37□□□□□ -1.07
CNOT4-201ENST00000315544 BTBD6Q96KE9 485 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 TACO1Q9BSH4 297 aaKnown RBP8.37□□□□□ -1.07
CNOT4-201ENST00000315544 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.37□□□□□ -1.07
CNOT4-201ENST00000315544 UVRAGQ9P2Y5 699 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 CTNNAL1Q9UBT7 734 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 SIX4Q9UIU6 781 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 POLIQ9UNA4 740 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 EMSYQ7Z589 1322 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 MIF4GDA9UHW6 222 aaKnown RBP8.37□□□□□ -1.07
CNOT4-201ENST00000315544 CALUO43852 315 aaPredicted RBP8.37□□□□□ -1.07
CNOT4-201ENST00000315544 SNNO75324 88 aaPredicted RBP8.37□□□□□ -1.07
CNOT4-201ENST00000315544 ATP6V1G2O95670 118 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 FGFR1OPO95684 399 aaKnown RBP8.37□□□□□ -1.07
CNOT4-201ENST00000315544 STAU1O95793 577 aaKnown RBP8.37□□□□□ -1.07
CNOT4-201ENST00000315544 FGGP02679 453 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 WEE2P0C1S8 567 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 FAM186BQ8IYM0 893 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 TMEM130Q8N3G9 435 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 ALLCQ8N6M5 410 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 CENPIQ92674 756 aaPredicted RBP8.37□□□□□ -1.07
CNOT4-201ENST00000315544 PSMB7Q99436 277 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 PDCD2LQ9BRP1 358 aa8.37□□□□□ -1.07
CNOT4-201ENST00000315544 SDCBP2Q9H190 292 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms