RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 SLITRK6Q9H5Y7 841 aa19.58■□□□□ 0.73
CCDC43-201ENST00000315286 ADAM22Q9P0K1 906 aa19.58■□□□□ 0.73
CCDC43-201ENST00000315286 POLIQ9UNA4 740 aa19.58■□□□□ 0.73
CCDC43-201ENST00000315286 CCDC66A2RUB6 948 aa19.58■□□□□ 0.72
CCDC43-201ENST00000315286 ZNF865P0CJ78 1059 aaPredicted RBP19.58■□□□□ 0.72
CCDC43-201ENST00000315286 PYGMP11217 842 aa19.58■□□□□ 0.72
CCDC43-201ENST00000315286 CTNNA2P26232 953 aa19.58■□□□□ 0.72
CCDC43-201ENST00000315286 CYP2C19P33261 490 aa19.58■□□□□ 0.72
CCDC43-201ENST00000315286 CCL14Q16627 93 aa19.58■□□□□ 0.72
CCDC43-201ENST00000315286 SLC10A6Q3KNW5 377 aa19.58■□□□□ 0.72
CCDC43-201ENST00000315286 OLFML2BQ68BL8 750 aa19.58■□□□□ 0.72
CCDC43-201ENST00000315286 PHF13Q86YI8 300 aaPredicted RBP19.58■□□□□ 0.72
CCDC43-201ENST00000315286 ERVK-5Q9HDB9 667 aa19.58■□□□□ 0.72
CCDC43-201ENST00000315286 NXF1Q9UBU9 619 aaKnown RBP19.58■□□□□ 0.72
CCDC43-201ENST00000315286 RRN3P2A6NIE6 340 aa19.57■□□□□ 0.72
CCDC43-201ENST00000315286 ERLIN2O94905 339 aa19.57■□□□□ 0.72
CCDC43-201ENST00000315286 FAM153BP0C7A2 387 aa19.57■□□□□ 0.72
CCDC43-201ENST00000315286 FGFR4P22455 802 aa19.57■□□□□ 0.72
CCDC43-201ENST00000315286 POU5F1Q01860 360 aaKnown RBP19.57■□□□□ 0.72
CCDC43-201ENST00000315286 TMEM62Q0P6H9 643 aa19.57■□□□□ 0.72
CCDC43-201ENST00000315286 PTP4A2Q12974 167 aa19.57■□□□□ 0.72
CCDC43-201ENST00000315286 PAK2Q13177 524 aa19.57■□□□□ 0.72
CCDC43-201ENST00000315286 KIZQ2M2Z5 673 aa19.57■□□□□ 0.72
CCDC43-201ENST00000315286 FAM153CQ494X1 144 aa19.57■□□□□ 0.72
CCDC43-201ENST00000315286 MMS22LQ6ZRQ5 1243 aa19.57■□□□□ 0.72
CCDC43-201ENST00000315286 KAT2BQ92831 832 aa19.57■□□□□ 0.72
CCDC43-201ENST00000315286 CAVIN3Q969G5 261 aa19.57■□□□□ 0.72
CCDC43-201ENST00000315286 CCDC102AQ96A19 550 aa19.57■□□□□ 0.72
CCDC43-201ENST00000315286 FAM153AQ9UHL3 310 aa19.57■□□□□ 0.72
CCDC43-201ENST00000315286 A0A1B0GUA9 196 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 BRD2P25440 801 aaKnown RBP19.56■□□□□ 0.72
CCDC43-201ENST00000315286 LIN9Q5TKA1 542 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 CHADLQ6NUI6 762 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 C17orf99Q6UX52 265 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 ZNF410Q86VK4 478 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 CCDC26Q8TAB7 109 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 VCPIP1Q96JH7 1222 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 CELF4Q9BZC1 486 aaKnown RBP19.56■□□□□ 0.72
CCDC43-201ENST00000315286 FAM49AQ9H0Q0 323 aaPredicted RBP19.56■□□□□ 0.72
CCDC43-201ENST00000315286 ASB7Q9H672 318 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 BHMG1C9JSJ3 638 aaPredicted RBP19.56■□□□□ 0.72
CCDC43-201ENST00000315286 TTI1O43156 1089 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 F2P00734 622 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 ITGB3P05106 788 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 SMIM10L2AP0DMW4 78 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 SMIM10L2BP0DMW5 78 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 CYP2B6P20813 491 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 AARSP49588 968 aaKnown RBP eCLIP19.56■□□□□ 0.72
CCDC43-201ENST00000315286 TERF2Q15554 542 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 CLUL1Q15846 466 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 MAATS1Q7Z4T9 603 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 TLK2Q86UE8 772 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 CXorf38Q8TB03 319 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 USP6NLQ92738 828 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 ADAMTS10Q9H324 1103 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 GINS2Q9Y248 185 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 CITO14578 2027 aa19.56■□□□□ 0.72
CCDC43-201ENST00000315286 MYO1FO00160 1098 aa19.55■□□□□ 0.72
CCDC43-201ENST00000315286 RAP1GAPP47736 663 aa19.55■□□□□ 0.72
CCDC43-201ENST00000315286 MAMLD1Q13495 774 aa19.55■□□□□ 0.72
CCDC43-201ENST00000315286 WDR72Q3MJ13 1102 aa19.55■□□□□ 0.72
CCDC43-201ENST00000315286 SAPCD2Q86UD0 394 aa19.55■□□□□ 0.72
CCDC43-201ENST00000315286 DDX42Q86XP3 938 aaKnown RBP eCLIP19.55■□□□□ 0.72
CCDC43-201ENST00000315286 ZDHHC14Q8IZN3 488 aa19.55■□□□□ 0.72
CCDC43-201ENST00000315286 TSEN2Q8NCE0 465 aaKnown RBP19.55■□□□□ 0.72
CCDC43-201ENST00000315286 TFAP2BQ92481 460 aa19.55■□□□□ 0.72
CCDC43-201ENST00000315286 GOLGA6L10A0A0M3HER8 536 aa19.55■□□□□ 0.72
CCDC43-201ENST00000315286 RWDD2BP57060 319 aa19.55■□□□□ 0.72
CCDC43-201ENST00000315286 C1QBPQ07021 282 aaKnown RBP19.55■□□□□ 0.72
CCDC43-201ENST00000315286 IRF5Q13568 498 aa19.55■□□□□ 0.72
CCDC43-201ENST00000315286 ZNF667Q5HYK9 610 aa19.55■□□□□ 0.72
CCDC43-201ENST00000315286 SEL1L2Q5TEA6 688 aa19.55■□□□□ 0.72
CCDC43-201ENST00000315286 PLEKHA7Q6IQ23 1121 aa19.55■□□□□ 0.72
CCDC43-201ENST00000315286 RGMBQ6NW40 437 aa19.55■□□□□ 0.72
CCDC43-201ENST00000315286 IFNL1Q8IU54 200 aa19.55■□□□□ 0.72
CCDC43-201ENST00000315286 CDHR5Q9HBB8 845 aa19.55■□□□□ 0.72
CCDC43-201ENST00000315286 TRIP11Q15643 1979 aa19.54■□□□□ 0.72
CCDC43-201ENST00000315286 NRCAMQ92823 1304 aa19.54■□□□□ 0.72
CCDC43-201ENST00000315286 AGPSO00116 658 aa19.54■□□□□ 0.72
CCDC43-201ENST00000315286 SYF2O95926 243 aaKnown RBP19.54■□□□□ 0.72
CCDC43-201ENST00000315286 MMP8P22894 467 aa19.54■□□□□ 0.72
CCDC43-201ENST00000315286 CDH8P55286 799 aa19.54■□□□□ 0.72
CCDC43-201ENST00000315286 NNTQ13423 1086 aa19.54■□□□□ 0.72
CCDC43-201ENST00000315286 KYAT1Q16773 422 aa19.54■□□□□ 0.72
CCDC43-201ENST00000315286 HSP90B2PQ58FF3 399 aa19.54■□□□□ 0.72
CCDC43-201ENST00000315286 ACAP3Q96P50 834 aa19.54■□□□□ 0.72
CCDC43-201ENST00000315286 BCO2Q9BYV7 579 aa19.54■□□□□ 0.72
CCDC43-201ENST00000315286 TRIP12Q14669 1992 aaPredicted RBP19.54■□□□□ 0.72
CCDC43-201ENST00000315286 GPR32O75388 356 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 ECHS1P30084 290 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 GGCXP38435 758 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 GUCY2FP51841 1108 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 GYS2P54840 703 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 HIC1Q14526 733 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 PPP2R5EQ16537 467 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 PPP1R2P3Q6NXS1 205 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 PRELID2Q8N945 189 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 C1orf131Q8NDD1 294 aaKnown RBP19.53■□□□□ 0.72
CCDC43-201ENST00000315286 ADPGKQ9BRR6 497 aa19.53■□□□□ 0.72
CCDC43-201ENST00000315286 SDCBP2Q9H190 292 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms