RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 SNX24Q9Y343 169 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 GRIN2DO15399 1336 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 CCDC188H7C350 402 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 HSF2BPO75031 334 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 ASS1P00966 412 aaKnown RBP13.23□□□□□ -0.29
RNF4-201ENST00000314289 PTENP60484 403 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 MCL1Q07820 350 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 C1orf54Q8WWF1 131 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 NLRP7Q8WX94 980 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 ZNF606Q8WXB4 792 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 CD101Q93033 1021 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 CAVIN3Q969G5 261 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 RRAGCQ9HB90 399 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 NDUFAB1O14561 156 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 KIAA0391O15091 583 aaKnown RBP13.23□□□□□ -0.29
RNF4-201ENST00000314289 SMPD1P17405 629 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 TMOD1P28289 359 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 HADHBP55084 474 aaKnown RBP13.23□□□□□ -0.29
RNF4-201ENST00000314289 RPL7AP62424 266 aaKnown RBP13.23□□□□□ -0.29
RNF4-201ENST00000314289 CFAP58Q5T655 872 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 SEL1L2Q5TEA6 688 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 WDR49Q8IV35 697 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 ABRAQ8N0Z2 381 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 C1orf131Q8NDD1 294 aaKnown RBP13.23□□□□□ -0.29
RNF4-201ENST00000314289 CCDC26Q8TAB7 109 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 ATG4AQ8WYN0 398 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 HERPUD2Q9BSE4 406 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 FAM49AQ9H0Q0 323 aaPredicted RBP13.23□□□□□ -0.29
RNF4-201ENST00000314289 CXCL16Q9H2A7 254 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 FZD8Q9H461 694 aa13.23□□□□□ -0.29
RNF4-201ENST00000314289 GBA2Q9HCG7 927 aaPredicted RBP13.23□□□□□ -0.29
RNF4-201ENST00000314289 DIS3Q9Y2L1 958 aaKnown RBP13.23□□□□□ -0.29
RNF4-201ENST00000314289 H3BRB1 525 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 MYO1FO00160 1098 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 MEFVO15553 781 aaPredicted RBP13.22□□□□□ -0.29
RNF4-201ENST00000314289 GH1P01241 217 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 TCF4P15884 667 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 CDR1P51861 262 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 NOMO3P69849 1222 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 POU5F1Q01860 360 aaKnown RBP13.22□□□□□ -0.29
RNF4-201ENST00000314289 ZNF699Q32M78 642 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 WDR72Q3MJ13 1102 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 TTMPQ5BVD1 217 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 MAATS1Q7Z4T9 603 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 PIK3R5Q8WYR1 880 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 TFAP2BQ92481 460 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 ACSF2Q96CM8 615 aaPredicted RBP13.22□□□□□ -0.29
RNF4-201ENST00000314289 TUT1Q9H6E5 874 aaKnown RBP13.22□□□□□ -0.29
RNF4-201ENST00000314289 YY1AP1Q9H869 796 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 UTP11Q9Y3A2 253 aaKnown RBP13.22□□□□□ -0.29
RNF4-201ENST00000314289 GOLGA6L10A0A0M3HER8 536 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 MIF4GDA9UHW6 222 aaKnown RBP13.22□□□□□ -0.29
RNF4-201ENST00000314289 GOLGA8KD6RF30 607 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 H0YHG0 523 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 OPA1O60313 960 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 CYP1A1P04798 512 aaPredicted RBP13.22□□□□□ -0.29
RNF4-201ENST00000314289 TNFRSF8P28908 595 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 LAMC2Q13753 1193 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 TFDP1Q14186 410 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 KIZQ2M2Z5 673 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 CYP4A22Q5TCH4 519 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 TSHZ1Q6ZSZ6 1077 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 MON1BQ7L1V2 547 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 NPLOC4Q8TAT6 608 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 MORC4Q8TE76 937 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 C16orf70Q9BSU1 422 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 PTPRHQ9HD43 1115 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 SETD4Q9NVD3 440 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 UVRAGQ9P2Y5 699 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 TJP2Q9UDY2 1190 aa13.22□□□□□ -0.29
RNF4-201ENST00000314289 LACTBL1A8MY62 500 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 RARAP10276 462 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 CD19P15391 556 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 CTNNA1P35221 906 aaKnown RBP13.21□□□□□ -0.29
RNF4-201ENST00000314289 GTF2A2P52657 109 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 PLTPP55058 493 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 CENPCQ03188 943 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 ATP13A4Q4VNC1 1196 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 ZFYVE27Q5T4F4 411 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 CCDC50Q8IVM0 306 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 SHCBP1Q8NEM2 672 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 UBLCP1Q8WVY7 318 aaPredicted RBP13.21□□□□□ -0.29
RNF4-201ENST00000314289 RPS6KC1Q96S38 1066 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 WNT8AQ9H1J5 351 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 C2orf40Q9H1Z8 148 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 SLITRK6Q9H5Y7 841 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 LRRC4CQ9HCJ2 640 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 CAPN7Q9Y6W3 813 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 KAT6AQ92794 2004 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 SIP14410 1827 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 ITGB3P05106 788 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 STAG3L1P0CL83 205 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 ARF4P18085 180 aaPredicted RBP13.21□□□□□ -0.29
RNF4-201ENST00000314289 HNRNPH1P31943 449 aaKnown RBP13.21□□□□□ -0.29
RNF4-201ENST00000314289 RWDD2BP57060 319 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 BPIFB4P59827 614 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 CCDC137Q6PK04 289 aaKnown RBP13.21□□□□□ -0.29
RNF4-201ENST00000314289 JAMLQ86YT9 394 aa13.21□□□□□ -0.29
RNF4-201ENST00000314289 RPF1Q9H9Y2 349 aaKnown RBP13.21□□□□□ -0.29
RNF4-201ENST00000314289 HMGXB4Q9UGU5 601 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms