RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 PGBD4Q96DM1 585 aa24.13■■□□□ 1.45
IRF3-201ENST00000309877 RPS6KC1Q96S38 1066 aa24.13■■□□□ 1.45
IRF3-201ENST00000309877 LACRTQ9GZZ8 138 aa24.13■■□□□ 1.45
IRF3-201ENST00000309877 ACP6Q9NPH0 428 aa24.13■■□□□ 1.45
IRF3-201ENST00000309877 CISHQ9NSE2 258 aa24.13■■□□□ 1.45
IRF3-201ENST00000309877 TRIM10Q9UDY6 481 aa24.13■■□□□ 1.45
IRF3-201ENST00000309877 CNTN6Q9UQ52 1028 aa24.13■■□□□ 1.45
IRF3-201ENST00000309877 DNAH12Q6ZR08 3092 aa24.12■■□□□ 1.45
IRF3-201ENST00000309877 ABL1P00519 1130 aa24.12■■□□□ 1.45
IRF3-201ENST00000309877 CYP3A5P20815 502 aa24.12■■□□□ 1.45
IRF3-201ENST00000309877 IBSPP21815 317 aaPredicted RBP24.12■■□□□ 1.45
IRF3-201ENST00000309877 SMYD5Q6GMV2 418 aa24.12■■□□□ 1.45
IRF3-201ENST00000309877 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.12■■□□□ 1.45
IRF3-201ENST00000309877 ANKRD33Q7Z3H0 272 aa24.12■■□□□ 1.45
IRF3-201ENST00000309877 UBR7Q8N806 425 aa24.12■■□□□ 1.45
IRF3-201ENST00000309877 RNF169Q8NCN4 708 aa24.12■■□□□ 1.45
IRF3-201ENST00000309877 MEIS3P2A8K0S8 358 aa24.11■■□□□ 1.45
IRF3-201ENST00000309877 PITPNM1O00562 1244 aa24.11■■□□□ 1.45
IRF3-201ENST00000309877 ATF7P17544 494 aaPredicted RBP24.11■■□□□ 1.45
IRF3-201ENST00000309877 MLH1P40692 756 aa24.11■■□□□ 1.45
IRF3-201ENST00000309877 GJA8P48165 433 aa24.11■■□□□ 1.45
IRF3-201ENST00000309877 TNNC1P63316 161 aa24.11■■□□□ 1.45
IRF3-201ENST00000309877 CDR2Q01850 454 aa24.11■■□□□ 1.45
IRF3-201ENST00000309877 C9orf57Q5W0N0 161 aa24.11■■□□□ 1.45
IRF3-201ENST00000309877 SYT10Q6XYQ8 523 aa24.11■■□□□ 1.45
IRF3-201ENST00000309877 LRRC52Q8N7C0 313 aa24.11■■□□□ 1.45
IRF3-201ENST00000309877 ZFP42Q96MM3 310 aa24.11■■□□□ 1.45
IRF3-201ENST00000309877 GAD1Q99259 594 aa24.11■■□□□ 1.45
IRF3-201ENST00000309877 BCO2Q9BYV7 579 aa24.11■■□□□ 1.45
IRF3-201ENST00000309877 PJA2O43164 708 aa24.11■■□□□ 1.45
IRF3-201ENST00000309877 AGMOQ6ZNB7 445 aa24.11■■□□□ 1.45
IRF3-201ENST00000309877 OLIG1Q8TAK6 271 aa24.11■■□□□ 1.45
IRF3-201ENST00000309877 IRX2Q9BZI1 471 aaPredicted RBP24.11■■□□□ 1.45
IRF3-201ENST00000309877 CYP3A43Q9HB55 503 aa24.11■■□□□ 1.45
IRF3-201ENST00000309877 SLC38A7Q9NVC3 462 aa24.11■■□□□ 1.45
IRF3-201ENST00000309877 NENFQ9UMX5 172 aa24.11■■□□□ 1.45
IRF3-201ENST00000309877 PTGESO14684 152 aa24.1■■□□□ 1.45
IRF3-201ENST00000309877 MMEP08473 750 aa24.1■■□□□ 1.45
IRF3-201ENST00000309877 CHRNB2P17787 502 aa24.1■■□□□ 1.45
IRF3-201ENST00000309877 ZNF677Q86XU0 584 aa24.1■■□□□ 1.45
IRF3-201ENST00000309877 ANKLE1Q8NAG6 615 aa24.1■■□□□ 1.45
IRF3-201ENST00000309877 KIF18AQ8NI77 898 aa24.1■■□□□ 1.45
IRF3-201ENST00000309877 DIS3LQ8TF46 1054 aaKnown RBP24.1■■□□□ 1.45
IRF3-201ENST00000309877 PPP1R10Q96QC0 940 aaKnown RBP24.1■■□□□ 1.45
IRF3-201ENST00000309877 UBN1Q9NPG3 1134 aa24.1■■□□□ 1.45
IRF3-201ENST00000309877 RGS18Q9NS28 235 aa24.1■■□□□ 1.45
IRF3-201ENST00000309877 DNAI1Q9UI46 699 aa24.1■■□□□ 1.45
IRF3-201ENST00000309877 TMCO5BA8MYB1 307 aa24.09■■□□□ 1.45
IRF3-201ENST00000309877 H2AFZP0C0S5 128 aa24.09■■□□□ 1.45
IRF3-201ENST00000309877 GNA15P30679 374 aa24.09■■□□□ 1.45
IRF3-201ENST00000309877 TLE2Q04725 743 aa24.09■■□□□ 1.45
IRF3-201ENST00000309877 TRIM60Q495X7 471 aa24.09■■□□□ 1.45
IRF3-201ENST00000309877 ZNF569Q5MCW4 686 aa24.09■■□□□ 1.45
IRF3-201ENST00000309877 H2AFVQ71UI9 128 aa24.09■■□□□ 1.45
IRF3-201ENST00000309877 ECHDC2Q86YB7 292 aa24.09■■□□□ 1.45
IRF3-201ENST00000309877 ZNF560Q96MR9 790 aa24.09■■□□□ 1.45
IRF3-201ENST00000309877 TOX2Q96NM4 488 aa24.09■■□□□ 1.45
IRF3-201ENST00000309877 MMS19Q96T76 1030 aa24.09■■□□□ 1.45
IRF3-201ENST00000309877 FTHL17Q9BXU8 183 aa24.09■■□□□ 1.45
IRF3-201ENST00000309877 PACSIN1Q9BY11 444 aa24.09■■□□□ 1.45
IRF3-201ENST00000309877 SMYD3Q9H7B4 428 aa24.09■■□□□ 1.45
IRF3-201ENST00000309877 RSAD1Q9HA92 442 aa24.09■■□□□ 1.45
IRF3-201ENST00000309877 MYO1AQ9UBC5 1043 aa24.09■■□□□ 1.45
IRF3-201ENST00000309877 DUSP10Q9Y6W6 482 aa24.09■■□□□ 1.45
IRF3-201ENST00000309877 ANO9A1A5B4 782 aa24.08■■□□□ 1.45
IRF3-201ENST00000309877 ARL5CA6NH57 179 aa24.08■■□□□ 1.45
IRF3-201ENST00000309877 PPEF2O14830 753 aa24.08■■□□□ 1.45
IRF3-201ENST00000309877 THP07101 528 aa24.08■■□□□ 1.45
IRF3-201ENST00000309877 COL6A1P12109 1028 aa24.08■■□□□ 1.45
IRF3-201ENST00000309877 PNPLA4P41247 253 aa24.08■■□□□ 1.45
IRF3-201ENST00000309877 RAP1GAPP47736 663 aa24.08■■□□□ 1.45
IRF3-201ENST00000309877 ZNF132P52740 706 aa24.08■■□□□ 1.45
IRF3-201ENST00000309877 CDH8P55286 799 aa24.08■■□□□ 1.45
IRF3-201ENST00000309877 FMO1Q01740 532 aa24.08■■□□□ 1.45
IRF3-201ENST00000309877 DDX1Q92499 740 aaKnown RBP24.08■■□□□ 1.45
IRF3-201ENST00000309877 PDCL3Q9H2J4 239 aa24.08■■□□□ 1.45
IRF3-201ENST00000309877 HIPK3Q9H422 1215 aa24.08■■□□□ 1.45
IRF3-201ENST00000309877 PUF60Q9UHX1 559 aaKnown RBP24.08■■□□□ 1.45
IRF3-201ENST00000309877 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.08■■□□□ 1.45
IRF3-201ENST00000309877 MACROD2A1Z1Q3 448 aa24.08■■□□□ 1.44
IRF3-201ENST00000309877 PIRO00625 290 aa24.08■■□□□ 1.44
IRF3-201ENST00000309877 NBNO60934 754 aa24.08■■□□□ 1.44
IRF3-201ENST00000309877 CALCAP01258 141 aa24.08■■□□□ 1.44
IRF3-201ENST00000309877 SOX4Q06945 474 aaPredicted RBP24.08■■□□□ 1.44
IRF3-201ENST00000309877 FAAP100Q0VG06 881 aa24.08■■□□□ 1.44
IRF3-201ENST00000309877 ZNF394Q53GI3 561 aa24.08■■□□□ 1.44
IRF3-201ENST00000309877 C1orf53Q5VUE5 145 aa24.08■■□□□ 1.44
IRF3-201ENST00000309877 SLC24A5Q71RS6 500 aa24.08■■□□□ 1.44
IRF3-201ENST00000309877 SECISBP2LQ93073 1101 aaKnown RBP24.08■■□□□ 1.44
IRF3-201ENST00000309877 GOLGA2P5Q9HBQ8 144 aa24.08■■□□□ 1.44
IRF3-201ENST00000309877 INTUQ9ULD6 942 aa24.08■■□□□ 1.44
IRF3-201ENST00000309877 PAXBP1Q9Y5B6 917 aa24.08■■□□□ 1.44
IRF3-201ENST00000309877 SNX9Q9Y5X1 595 aa24.08■■□□□ 1.44
IRF3-201ENST00000309877 THAP12O43422 761 aa24.07■■□□□ 1.44
IRF3-201ENST00000309877 ATP8B3O60423 1300 aa24.07■■□□□ 1.44
IRF3-201ENST00000309877 CASQ1P31415 396 aa24.07■■□□□ 1.44
IRF3-201ENST00000309877 BRCA2P51587 3418 aa24.07■■□□□ 1.44
IRF3-201ENST00000309877 RTN4RL1Q86UN2 441 aaPredicted RBP24.07■■□□□ 1.44
IRF3-201ENST00000309877 PALB2Q86YC2 1186 aa24.07■■□□□ 1.44
IRF3-201ENST00000309877 TTC39CQ8N584 583 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms