RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 OTOP2Q7RTS6 562 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 FILIP1Q7Z7B0 1213 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 RALYLQ86SE5 291 aaKnown RBP5.46□□□□□ -1.54
CKS1B-201ENST00000308987 CPXCR1Q8N123 301 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 MSL3Q8N5Y2 521 aaKnown RBP5.46□□□□□ -1.54
CKS1B-201ENST00000308987 NUP133Q8WUM0 1156 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 ATXN2LQ8WWM7 1075 aaKnown RBP5.46□□□□□ -1.54
CKS1B-201ENST00000308987 OSBP2Q969R2 916 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 KREMEN1Q96MU8 473 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 STRBPQ96SI9 672 aaKnown RBP5.46□□□□□ -1.54
CKS1B-201ENST00000308987 DUSP9Q99956 384 aaKnown RBP5.46□□□□□ -1.54
CKS1B-201ENST00000308987 PLCD4Q9BRC7 762 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 NOC4LQ9BVI4 516 aaKnown RBP5.46□□□□□ -1.54
CKS1B-201ENST00000308987 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.46□□□□□ -1.54
CKS1B-201ENST00000308987 TMX1Q9H3N1 280 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 ABHD16BQ9H3Z7 469 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 SH2D4AQ9H788 454 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 IL23AQ9NPF7 189 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 PDGFCQ9NRA1 345 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 NYAP2Q9P242 653 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 THEGQ9P2T0 379 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 ORC3Q9UBD5 711 aaPredicted RBP5.46□□□□□ -1.54
CKS1B-201ENST00000308987 HOOK1Q9UJC3 728 aaKnown RBP5.46□□□□□ -1.54
CKS1B-201ENST00000308987 ZNF215Q9UL58 517 aaPredicted RBP5.46□□□□□ -1.54
CKS1B-201ENST00000308987 HPSEQ9Y251 543 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 SLC4A4Q9Y6R1 1079 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 DCHS1Q96JQ0 3298 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 LOXHD1Q8IVV2 1947 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 NEDD4P46934 1319 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 KAT6AQ92794 2004 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 KLF18A0A0U1RQI7 1052 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 M0R2C6 588 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 ZNF213O14771 459 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 FOXP2O15409 715 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 ARHGAP6O43182 974 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 B4GALT4O60513 344 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 PRDM1O75626 825 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 FGAP02671 866 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 MPOP05164 745 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 LIFRP42702 1097 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 NDUFA8P51970 172 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 CCL23P55773 120 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 SNAP25P60880 206 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 PSMC6P62333 389 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 ADAM17P78536 824 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 MRPS5P82675 430 aaKnown RBP5.45□□□□□ -1.54
CKS1B-201ENST00000308987 FANCCQ00597 558 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 MYL5Q02045 173 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 CEBPZQ03701 1054 aaKnown RBP5.45□□□□□ -1.54
CKS1B-201ENST00000308987 TRDNQ13061 729 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 TUBB2AQ13885 445 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 MUM1L1Q5H9M0 696 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 RESP18Q5W5W9 173 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 E4F1Q66K89 784 aaPredicted RBP5.45□□□□□ -1.54
CKS1B-201ENST00000308987 TAPT1Q6NXT6 567 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 RNF111Q6ZNA4 994 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 TMC6Q7Z403 805 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 LRRC47Q8N1G4 583 aaKnown RBP5.45□□□□□ -1.54
CKS1B-201ENST00000308987 TRIML1Q8N9V2 468 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 PRPF38AQ8NAV1 312 aaKnown RBP5.45□□□□□ -1.54
CKS1B-201ENST00000308987 PCSK9Q8NBP7 692 aaKnown RBP5.45□□□□□ -1.54
CKS1B-201ENST00000308987 WASF1Q92558 559 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 MKL1Q969V6 931 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 CEP95Q96GE4 821 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 SCLYQ96I15 445 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 PPP1R13BQ96KQ4 1090 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 CCDC74BQ96LY2 380 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 GLT1D1Q96MS3 346 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 SORCS2Q96PQ0 1159 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 UHRF1Q96T88 793 aaPredicted RBP5.45□□□□□ -1.54
CKS1B-201ENST00000308987 TUBB2BQ9BVA1 445 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 LRRC2Q9BYS8 371 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 XPO4Q9C0E2 1151 aaKnown RBP5.45□□□□□ -1.54
CKS1B-201ENST00000308987 EPHX3Q9H6B9 360 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 NCOA5Q9HCD5 579 aaKnown RBP5.45□□□□□ -1.54
CKS1B-201ENST00000308987 A1CFQ9NQ94 594 aaKnown RBP5.45□□□□□ -1.54
CKS1B-201ENST00000308987 INCENPQ9NQS7 918 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 ARGLU1Q9NWB6 273 aaPredicted RBP5.45□□□□□ -1.54
CKS1B-201ENST00000308987 IFNKQ9P0W0 207 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.45□□□□□ -1.54
CKS1B-201ENST00000308987 AK5Q9Y6K8 562 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 FRYLO94915 3013 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 MROH7Q68CQ1 1323 aa5.45□□□□□ -1.54
CKS1B-201ENST00000308987 CACNA1HO95180 2353 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 ZDBF2Q9HCK1 2354 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 PLIN4Q96Q06 1357 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 A0A1B0GVL5 298 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 CCDC66A2RUB6 948 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 USP27XA6NNY8 438 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 GOLGA8BA8MQT2 603 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 MINDY4BA8MYZ0 360 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 STX10O60499 249 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 TECTAO75443 2155 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 FGBP02675 491 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 PFKFB1P16118 471 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 COPB2P35606 906 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 PLA2G5P39877 138 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 SYKP43405 635 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 ANTXR2P58335 489 aa5.44□□□□□ -1.54
CKS1B-201ENST00000308987 TNFAIP2Q03169 654 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms