RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 ABHD16BQ9H3Z7 469 aa25.67■■□□□ 1.7
RFWD2-201ENST00000308769 PDZD7Q9H5P4 517 aa25.67■■□□□ 1.7
RFWD2-201ENST00000308769 CITO14578 2027 aa25.67■■□□□ 1.7
RFWD2-201ENST00000308769 DAPK3O43293 454 aa25.67■■□□□ 1.7
RFWD2-201ENST00000308769 TMOD1P28289 359 aa25.67■■□□□ 1.7
RFWD2-201ENST00000308769 ASPAP45381 313 aa25.67■■□□□ 1.7
RFWD2-201ENST00000308769 PPFIA1Q13136 1202 aa25.67■■□□□ 1.7
RFWD2-201ENST00000308769 ZNF236Q9UL36 1845 aa25.66■■□□□ 1.7
RFWD2-201ENST00000308769 TCRBV7S2A1N4TA0A589 114 aa25.66■■□□□ 1.7
RFWD2-201ENST00000308769 STAG3L1P0CL83 205 aa25.66■■□□□ 1.7
RFWD2-201ENST00000308769 ARF4P18085 180 aaPredicted RBP25.66■■□□□ 1.7
RFWD2-201ENST00000308769 BRD2P25440 801 aaKnown RBP25.66■■□□□ 1.7
RFWD2-201ENST00000308769 RWDD2BP57060 319 aa25.66■■□□□ 1.7
RFWD2-201ENST00000308769 GRIK4Q16099 956 aa25.66■■□□□ 1.7
RFWD2-201ENST00000308769 MARCH8Q5T0T0 291 aa25.66■■□□□ 1.7
RFWD2-201ENST00000308769 DAB2IPQ5VWQ8 1189 aa25.66■■□□□ 1.7
RFWD2-201ENST00000308769 NLRP7Q8WX94 980 aa25.66■■□□□ 1.7
RFWD2-201ENST00000308769 C18orf8Q96DM3 657 aa25.66■■□□□ 1.7
RFWD2-201ENST00000308769 KRT19P08727 400 aa25.66■■□□□ 1.7
RFWD2-201ENST00000308769 DR1Q01658 176 aa25.66■■□□□ 1.7
RFWD2-201ENST00000308769 PTP4A2Q12974 167 aa25.66■■□□□ 1.7
RFWD2-201ENST00000308769 PHF13Q86YI8 300 aaPredicted RBP25.66■■□□□ 1.7
RFWD2-201ENST00000308769 PRELID2Q8N945 189 aa25.66■■□□□ 1.7
RFWD2-201ENST00000308769 EIF1ADQ8N9N8 165 aaKnown RBP25.66■■□□□ 1.7
RFWD2-201ENST00000308769 DPH5Q9H2P9 285 aa25.66■■□□□ 1.7
RFWD2-201ENST00000308769 CPA4Q9UI42 421 aa25.66■■□□□ 1.7
RFWD2-201ENST00000308769 POLIQ9UNA4 740 aa25.66■■□□□ 1.7
RFWD2-201ENST00000308769 UTP11Q9Y3A2 253 aaKnown RBP25.66■■□□□ 1.7
RFWD2-201ENST00000308769 TRIP11Q15643 1979 aa25.65■■□□□ 1.7
RFWD2-201ENST00000308769 LACTBL1A8MY62 500 aa25.65■■□□□ 1.7
RFWD2-201ENST00000308769 MYO1FO00160 1098 aa25.65■■□□□ 1.7
RFWD2-201ENST00000308769 IL18RAPO95256 599 aa25.65■■□□□ 1.7
RFWD2-201ENST00000308769 LIN9Q5TKA1 542 aa25.65■■□□□ 1.7
RFWD2-201ENST00000308769 MREGQ8N565 214 aa25.65■■□□□ 1.7
RFWD2-201ENST00000308769 SEC14L1Q92503 715 aa25.65■■□□□ 1.7
RFWD2-201ENST00000308769 SCLT1Q96NL6 688 aa25.65■■□□□ 1.7
RFWD2-201ENST00000308769 ZIM3Q96PE6 472 aa25.65■■□□□ 1.7
RFWD2-201ENST00000308769 TRIM31Q9BZY9 425 aa25.65■■□□□ 1.7
RFWD2-201ENST00000308769 FAM204AQ9H8W3 233 aa25.65■■□□□ 1.7
RFWD2-201ENST00000308769 NXF1Q9UBU9 619 aaKnown RBP25.65■■□□□ 1.7
RFWD2-201ENST00000308769 SIX4Q9UIU6 781 aa25.65■■□□□ 1.7
RFWD2-201ENST00000308769 HSF2BPO75031 334 aa25.64■■□□□ 1.7
RFWD2-201ENST00000308769 PHF2O75151 1096 aa25.64■■□□□ 1.7
RFWD2-201ENST00000308769 HOXD8P13378 290 aaPredicted RBP25.64■■□□□ 1.7
RFWD2-201ENST00000308769 LLGL1Q15334 1064 aa25.64■■□□□ 1.7
RFWD2-201ENST00000308769 JADE1Q6IE81 842 aa25.64■■□□□ 1.7
RFWD2-201ENST00000308769 C1orf127Q8N9H9 656 aa25.64■■□□□ 1.7
RFWD2-201ENST00000308769 UBE2Q2Q8WVN8 375 aa25.64■■□□□ 1.7
RFWD2-201ENST00000308769 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.64■■□□□ 1.7
RFWD2-201ENST00000308769 ZEB2O60315 1214 aa25.64■■□□□ 1.69
RFWD2-201ENST00000308769 GJB6O95452 261 aa25.64■■□□□ 1.69
RFWD2-201ENST00000308769 MCF2P10911 925 aa25.64■■□□□ 1.69
RFWD2-201ENST00000308769 HSPA6P17066 643 aa25.64■■□□□ 1.69
RFWD2-201ENST00000308769 MAMLD1Q13495 774 aa25.64■■□□□ 1.69
RFWD2-201ENST00000308769 PPP2R5EQ16537 467 aa25.64■■□□□ 1.69
RFWD2-201ENST00000308769 DGKDQ16760 1214 aa25.64■■□□□ 1.69
RFWD2-201ENST00000308769 CST9Q5W186 159 aa25.64■■□□□ 1.69
RFWD2-201ENST00000308769 SLC13A5Q86YT5 568 aaPredicted RBP25.64■■□□□ 1.69
RFWD2-201ENST00000308769 ZKSCAN7Q9P0L1 754 aaPredicted RBP25.64■■□□□ 1.69
RFWD2-201ENST00000308769 RAP1GAPP47736 663 aa25.63■■□□□ 1.69
RFWD2-201ENST00000308769 PRAMEF19Q5SWL8 479 aa25.63■■□□□ 1.69
RFWD2-201ENST00000308769 ALS2CLQ60I27 953 aa25.63■■□□□ 1.69
RFWD2-201ENST00000308769 PPP1R13LQ8WUF5 828 aa25.63■■□□□ 1.69
RFWD2-201ENST00000308769 VCPIP1Q96JH7 1222 aa25.63■■□□□ 1.69
RFWD2-201ENST00000308769 SLC15A5A6NIM6 579 aa25.63■■□□□ 1.69
RFWD2-201ENST00000308769 C1QBPQ07021 282 aaKnown RBP25.63■■□□□ 1.69
RFWD2-201ENST00000308769 TTC27Q6P3X3 843 aa25.63■■□□□ 1.69
RFWD2-201ENST00000308769 C1orf131Q8NDD1 294 aaKnown RBP25.63■■□□□ 1.69
RFWD2-201ENST00000308769 TFAP2BQ92481 460 aa25.63■■□□□ 1.69
RFWD2-201ENST00000308769 EXOC4Q96A65 974 aa25.63■■□□□ 1.69
RFWD2-201ENST00000308769 SH3GL2Q99962 352 aa25.63■■□□□ 1.69
RFWD2-201ENST00000308769 CYP2C19P33261 490 aa25.62■■□□□ 1.69
RFWD2-201ENST00000308769 TNFAIP2Q03169 654 aa25.62■■□□□ 1.69
RFWD2-201ENST00000308769 IQSEC1Q6DN90 963 aa25.62■■□□□ 1.69
RFWD2-201ENST00000308769 PLEKHA7Q6IQ23 1121 aa25.62■■□□□ 1.69
RFWD2-201ENST00000308769 KIAA0319LQ8IZA0 1049 aa25.62■■□□□ 1.69
RFWD2-201ENST00000308769 PIK3R5Q8WYR1 880 aa25.62■■□□□ 1.69
RFWD2-201ENST00000308769 MAGOHBQ96A72 148 aaKnown RBP25.62■■□□□ 1.69
RFWD2-201ENST00000308769 RUFY1Q96T51 708 aa25.62■■□□□ 1.69
RFWD2-201ENST00000308769 TSPAN1O60635 241 aa25.61■■□□□ 1.69
RFWD2-201ENST00000308769 ITGB3P05106 788 aa25.61■■□□□ 1.69
RFWD2-201ENST00000308769 MMP8P22894 467 aa25.61■■□□□ 1.69
RFWD2-201ENST00000308769 FLT3P36888 993 aa25.61■■□□□ 1.69
RFWD2-201ENST00000308769 HSPA9P38646 679 aaKnown RBP25.61■■□□□ 1.69
RFWD2-201ENST00000308769 DHX34Q14147 1143 aaKnown RBP25.61■■□□□ 1.69
RFWD2-201ENST00000308769 SIX1Q15475 284 aaPredicted RBP25.61■■□□□ 1.69
RFWD2-201ENST00000308769 JAMLQ86YT9 394 aa25.61■■□□□ 1.69
RFWD2-201ENST00000308769 IQCKQ8N0W5 287 aa25.61■■□□□ 1.69
RFWD2-201ENST00000308769 RAB17Q9H0T7 212 aa25.61■■□□□ 1.69
RFWD2-201ENST00000308769 MRPL47Q9HD33 250 aaKnown RBP25.61■■□□□ 1.69
RFWD2-201ENST00000308769 SETD4Q9NVD3 440 aa25.61■■□□□ 1.69
RFWD2-201ENST00000308769 PROSCO94903 275 aa25.61■■□□□ 1.69
RFWD2-201ENST00000308769 FGFR4P22455 802 aa25.61■■□□□ 1.69
RFWD2-201ENST00000308769 CHRNA3P32297 505 aa25.61■■□□□ 1.69
RFWD2-201ENST00000308769 SLC1A1P43005 524 aa25.61■■□□□ 1.69
RFWD2-201ENST00000308769 SLC10A6Q3KNW5 377 aa25.61■■□□□ 1.69
RFWD2-201ENST00000308769 WDR72Q3MJ13 1102 aa25.61■■□□□ 1.69
RFWD2-201ENST00000308769 CFAP58Q5T655 872 aa25.61■■□□□ 1.69
RFWD2-201ENST00000308769 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.61■■□□□ 1.69
RFWD2-201ENST00000308769 O00370 1275 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms