RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 HTR4Q13639 388 aa21.5■■□□□ 1.03
PDZRN3-202ENST00000308537 TMEM132DQ14C87 1099 aa21.5■■□□□ 1.03
PDZRN3-202ENST00000308537 CTXN3Q4LDR2 81 aa21.5■■□□□ 1.03
PDZRN3-202ENST00000308537 ZNF280DQ6N043 979 aa21.5■■□□□ 1.03
PDZRN3-202ENST00000308537 EPM2AIP1Q7L775 607 aaPredicted RBP21.5■■□□□ 1.03
PDZRN3-202ENST00000308537 APPL2Q8NEU8 664 aa21.5■■□□□ 1.03
PDZRN3-202ENST00000308537 CXorf38Q8TB03 319 aa21.5■■□□□ 1.03
PDZRN3-202ENST00000308537 FAM212AQ96EL1 285 aa21.5■■□□□ 1.03
PDZRN3-202ENST00000308537 BORCS6Q96GS4 357 aa21.5■■□□□ 1.03
PDZRN3-202ENST00000308537 CBWD1Q9BRT8 395 aa21.5■■□□□ 1.03
PDZRN3-202ENST00000308537 PCDHB13Q9Y5F0 798 aa21.5■■□□□ 1.03
PDZRN3-202ENST00000308537 XPOTO43592 962 aaKnown RBP21.49■■□□□ 1.03
PDZRN3-202ENST00000308537 HSP90AA1P07900 732 aaKnown RBP21.49■■□□□ 1.03
PDZRN3-202ENST00000308537 GARTP22102 1010 aa21.49■■□□□ 1.03
PDZRN3-202ENST00000308537 FSHRP23945 695 aa21.49■■□□□ 1.03
PDZRN3-202ENST00000308537 CASP1P29466 404 aa21.49■■□□□ 1.03
PDZRN3-202ENST00000308537 ALCAMQ13740 583 aa21.49■■□□□ 1.03
PDZRN3-202ENST00000308537 POSTNQ15063 836 aa21.49■■□□□ 1.03
PDZRN3-202ENST00000308537 SLC5A9Q2M3M2 681 aa21.49■■□□□ 1.03
PDZRN3-202ENST00000308537 TPGS2Q68CL5 300 aa21.49■■□□□ 1.03
PDZRN3-202ENST00000308537 BRSK2Q8IWQ3 736 aa21.49■■□□□ 1.03
PDZRN3-202ENST00000308537 SAAL1Q96ER3 474 aa21.49■■□□□ 1.03
PDZRN3-202ENST00000308537 FAM84AQ96KN4 292 aa21.49■■□□□ 1.03
PDZRN3-202ENST00000308537 C7orf25Q9BPX7 421 aa21.49■■□□□ 1.03
PDZRN3-202ENST00000308537 RPP25Q9BUL9 199 aaKnown RBP21.49■■□□□ 1.03
PDZRN3-202ENST00000308537 CRISPLD1Q9H336 500 aa21.49■■□□□ 1.03
PDZRN3-202ENST00000308537 AVENQ9NQS1 362 aaPredicted RBP21.49■■□□□ 1.03
PDZRN3-202ENST00000308537 POLR2DO15514 142 aaKnown RBP21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 TYMPP19971 482 aa21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 YWHAHQ04917 246 aaPredicted RBP21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 RNF19BQ6ZMZ0 732 aa21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 CCDC65Q8IXS2 484 aa21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 SLC44A3Q8N4M1 653 aa21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 IQUBQ8NA54 791 aa21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 PRSS33Q8NF86 280 aa21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 ST13P5Q8NFI4 369 aaPredicted RBP21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 FGF13Q92913 245 aa21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 FGF14Q92915 247 aa21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 SENP8Q96LD8 212 aa21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 KCNH6Q9H252 994 aa21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 AFF4Q9UHB7 1163 aaKnown RBP21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 CDH7Q9ULB5 785 aa21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 EXOC7Q9UPT5 735 aa21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 INSL5Q9Y5Q6 135 aa21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 MYO15AQ9UKN7 3530 aa21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 DMDP11532 3685 aa21.48■■□□□ 1.03
PDZRN3-202ENST00000308537 XYLBO75191 536 aa21.47■■□□□ 1.03
PDZRN3-202ENST00000308537 CYP11A1P05108 521 aa21.47■■□□□ 1.03
PDZRN3-202ENST00000308537 OR4Q2P0C623 313 aa21.47■■□□□ 1.03
PDZRN3-202ENST00000308537 NPR3P17342 541 aa21.47■■□□□ 1.03
PDZRN3-202ENST00000308537 ARPP19P56211 112 aa21.47■■□□□ 1.03
PDZRN3-202ENST00000308537 PRSS36Q5K4E3 855 aa21.47■■□□□ 1.03
PDZRN3-202ENST00000308537 CWF19L1Q69YN2 538 aaKnown RBP21.47■■□□□ 1.03
PDZRN3-202ENST00000308537 NPAS3Q8IXF0 933 aa21.47■■□□□ 1.03
PDZRN3-202ENST00000308537 RTP3Q9BQQ7 232 aa21.47■■□□□ 1.03
PDZRN3-202ENST00000308537 FAM213AQ9BRX8 229 aa21.47■■□□□ 1.03
PDZRN3-202ENST00000308537 RHOP08100 348 aa21.46■■□□□ 1.03
PDZRN3-202ENST00000308537 AVPR2P30518 371 aa21.46■■□□□ 1.03
PDZRN3-202ENST00000308537 ADCY1Q08828 1119 aa21.46■■□□□ 1.03
PDZRN3-202ENST00000308537 PABPC1LQ4VXU2 614 aaKnown RBP21.46■■□□□ 1.03
PDZRN3-202ENST00000308537 NT5DC4Q86YG4 428 aa21.46■■□□□ 1.03
PDZRN3-202ENST00000308537 OR10T2Q8NGX3 314 aa21.46■■□□□ 1.03
PDZRN3-202ENST00000308537 ZNF507Q8TCN5 953 aa21.46■■□□□ 1.03
PDZRN3-202ENST00000308537 NXPE3Q969Y0 559 aa21.46■■□□□ 1.03
PDZRN3-202ENST00000308537 TMEM209Q96SK2 561 aa21.46■■□□□ 1.03
PDZRN3-202ENST00000308537 CYP4F11Q9HBI6 524 aa21.46■■□□□ 1.03
PDZRN3-202ENST00000308537 DPP3Q9NY33 737 aa21.46■■□□□ 1.03
PDZRN3-202ENST00000308537 CEP72Q9P209 647 aa21.46■■□□□ 1.03
PDZRN3-202ENST00000308537 KCNH3Q9ULD8 1083 aa21.46■■□□□ 1.03
PDZRN3-202ENST00000308537 POLIQ9UNA4 740 aa21.46■■□□□ 1.03
PDZRN3-202ENST00000308537 ZFP37Q9Y6Q3 630 aaPredicted RBP21.46■■□□□ 1.03
PDZRN3-202ENST00000308537 NUMBLQ9Y6R0 609 aa21.46■■□□□ 1.03
PDZRN3-202ENST00000308537 GOLGA8IPA6NC78 632 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 GOLGA8JA6NMD2 632 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 TGFB1I1O43294 461 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 ACTN4O43707 911 aaKnown RBP21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 MOSPD3O75425 235 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 IL18RAPO95256 599 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 CCR2P41597 374 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 ME1P48163 572 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 TCF15Q12870 199 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 PARM1Q6UWI2 310 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 DSTYKQ6XUX3 929 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 UNC13DQ70J99 1090 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 SUGP1Q8IWZ8 645 aaKnown RBP21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 TMEM105Q8N8V8 129 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 LEO1Q8WVC0 666 aaPredicted RBP21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 FAM122AQ96E09 287 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 LRRC27Q9C0I9 530 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 BLZF1Q9H2G9 400 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 TMEM206Q9H813 350 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 MAGEF1Q9HAY2 307 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 CFAP45Q9UL16 551 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 MAFFQ9ULX9 164 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 PTPRJQ12913 1337 aa21.45■■□□□ 1.02
PDZRN3-202ENST00000308537 COL4A3Q01955 1670 aa21.44■■□□□ 1.02
PDZRN3-202ENST00000308537 EIF3DO15371 548 aaKnown RBP eCLIP21.44■■□□□ 1.02
PDZRN3-202ENST00000308537 EXTL3O43909 919 aa21.44■■□□□ 1.02
PDZRN3-202ENST00000308537 PAX3P23760 479 aa21.44■■□□□ 1.02
PDZRN3-202ENST00000308537 ASIC1P78348 528 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms