RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 HES6Q96HZ4 224 aa23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 ADPGKQ9BRR6 497 aa23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 PLEKHA4Q9H4M7 779 aa23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 NPTXRO95502 500 aa23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 PGK1P00558 417 aa23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 ITGB3P05106 788 aa23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 PRKCZQ05513 592 aa23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 GPS2Q13227 327 aa23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 TMEM40Q8WWA1 233 aa23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 NUP85Q9BW27 656 aa23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 CISHQ9NSE2 258 aa23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 Q9Y3F1 56 aa23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 HTTP42858 3142 aa23.99■■□□□ 1.43
PDLIM2-202ENST00000308354 TRIP12Q14669 1992 aaPredicted RBP23.98■■□□□ 1.43
PDLIM2-202ENST00000308354 THAP12O43422 761 aa23.98■■□□□ 1.43
PDLIM2-202ENST00000308354 GLI1P08151 1106 aa23.98■■□□□ 1.43
PDLIM2-202ENST00000308354 LLGL2Q6P1M3 1020 aa23.98■■□□□ 1.43
PDLIM2-202ENST00000308354 UBR7Q8N806 425 aa23.98■■□□□ 1.43
PDLIM2-202ENST00000308354 ACTRT1Q8TDG2 376 aa23.98■■□□□ 1.43
PDLIM2-202ENST00000308354 ACAP3Q96P50 834 aa23.98■■□□□ 1.43
PDLIM2-202ENST00000308354 TMEM59LQ9UK28 342 aa23.98■■□□□ 1.43
PDLIM2-202ENST00000308354 CNTN6Q9UQ52 1028 aa23.98■■□□□ 1.43
PDLIM2-202ENST00000308354 HES2Q9Y543 173 aa23.98■■□□□ 1.43
PDLIM2-202ENST00000308354 A0A0U1RQG5 324 aaPredicted RBP23.98■■□□□ 1.43
PDLIM2-202ENST00000308354 ASPAP45381 313 aa23.98■■□□□ 1.43
PDLIM2-202ENST00000308354 RAP1GAPP47736 663 aa23.98■■□□□ 1.43
PDLIM2-202ENST00000308354 GNASQ5JWF2 1037 aa23.98■■□□□ 1.43
PDLIM2-202ENST00000308354 EIF2AQ9BY44 585 aaKnown RBP23.98■■□□□ 1.43
PDLIM2-202ENST00000308354 HPCAL4Q9UM19 191 aa23.98■■□□□ 1.43
PDLIM2-202ENST00000308354 ALG6Q9Y672 507 aa23.98■■□□□ 1.43
PDLIM2-202ENST00000308354 ZSCAN5CA6NGD5 496 aaPredicted RBP23.97■■□□□ 1.43
PDLIM2-202ENST00000308354 CYBAP13498 195 aa23.97■■□□□ 1.43
PDLIM2-202ENST00000308354 MESDQ14696 234 aa23.97■■□□□ 1.43
PDLIM2-202ENST00000308354 WDR72Q3MJ13 1102 aa23.97■■□□□ 1.43
PDLIM2-202ENST00000308354 ZNF677Q86XU0 584 aa23.97■■□□□ 1.43
PDLIM2-202ENST00000308354 C7orf31Q8N865 590 aa23.97■■□□□ 1.43
PDLIM2-202ENST00000308354 VIPAS39Q9H9C1 493 aa23.97■■□□□ 1.43
PDLIM2-202ENST00000308354 RNF19AQ9NV58 838 aa23.97■■□□□ 1.43
PDLIM2-202ENST00000308354 CNOT8Q9UFF9 292 aaKnown RBP23.97■■□□□ 1.43
PDLIM2-202ENST00000308354 NOC2LQ9Y3T9 749 aaKnown RBP23.97■■□□□ 1.43
PDLIM2-202ENST00000308354 DUSP11O75319 330 aaKnown RBP23.96■■□□□ 1.43
PDLIM2-202ENST00000308354 HEXIM1O94992 359 aaKnown RBP23.96■■□□□ 1.43
PDLIM2-202ENST00000308354 DARSP14868 501 aaKnown RBP23.96■■□□□ 1.43
PDLIM2-202ENST00000308354 CPNE8Q86YQ8 564 aa23.96■■□□□ 1.43
PDLIM2-202ENST00000308354 KLHL7Q8IXQ5 586 aa23.96■■□□□ 1.43
PDLIM2-202ENST00000308354 ZNF564Q8TBZ8 553 aaPredicted RBP23.96■■□□□ 1.43
PDLIM2-202ENST00000308354 GTF3C4Q9UKN8 822 aa23.96■■□□□ 1.43
PDLIM2-202ENST00000308354 MROH7Q68CQ1 1323 aa23.96■■□□□ 1.43
PDLIM2-202ENST00000308354 C17orf102A2RUQ5 167 aa23.96■■□□□ 1.43
PDLIM2-202ENST00000308354 PGRMC1O00264 195 aaKnown RBP23.96■■□□□ 1.43
PDLIM2-202ENST00000308354 MYCNP04198 464 aaPredicted RBP23.96■■□□□ 1.43
PDLIM2-202ENST00000308354 CYP1A2P05177 515 aa23.96■■□□□ 1.43
PDLIM2-202ENST00000308354 CDH8P55286 799 aa23.96■■□□□ 1.43
PDLIM2-202ENST00000308354 CXCL17Q6UXB2 119 aa23.96■■□□□ 1.43
PDLIM2-202ENST00000308354 ZNF606Q8WXB4 792 aa23.96■■□□□ 1.43
PDLIM2-202ENST00000308354 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.96■■□□□ 1.431e-6■■■■□ 19.3
PDLIM2-202ENST00000308354 AP1M1Q9BXS5 423 aa23.96■■□□□ 1.43
PDLIM2-202ENST00000308354 ASB7Q9H672 318 aa23.96■■□□□ 1.43
PDLIM2-202ENST00000308354 SNTG2Q9NY99 539 aa23.96■■□□□ 1.43
PDLIM2-202ENST00000308354 CEP350Q5VT06 3117 aa23.95■■□□□ 1.43
PDLIM2-202ENST00000308354 ESYT3A0FGR9 886 aa23.95■■□□□ 1.42
PDLIM2-202ENST00000308354 CYP1A1P04798 512 aaPredicted RBP23.95■■□□□ 1.42
PDLIM2-202ENST00000308354 EIF4BP23588 611 aaKnown RBP23.95■■□□□ 1.42
PDLIM2-202ENST00000308354 ZNF132P52740 706 aa23.95■■□□□ 1.42
PDLIM2-202ENST00000308354 GYS2P54840 703 aa23.95■■□□□ 1.42
PDLIM2-202ENST00000308354 TMEM132DQ14C87 1099 aa23.95■■□□□ 1.42
PDLIM2-202ENST00000308354 MFSD14CQ5VZR4 134 aa23.95■■□□□ 1.42
PDLIM2-202ENST00000308354 MCOLN2Q8IZK6 566 aa23.95■■□□□ 1.42
PDLIM2-202ENST00000308354 HHIPL1Q96JK4 782 aa23.95■■□□□ 1.42
PDLIM2-202ENST00000308354 BRD2P25440 801 aaKnown RBP23.95■■□□□ 1.42
PDLIM2-202ENST00000308354 NSFP46459 744 aaKnown RBP23.95■■□□□ 1.42
PDLIM2-202ENST00000308354 HADHBP55084 474 aaKnown RBP23.95■■□□□ 1.42
PDLIM2-202ENST00000308354 TNNC1P63316 161 aa23.95■■□□□ 1.42
PDLIM2-202ENST00000308354 CXorf38Q8TB03 319 aa23.95■■□□□ 1.42
PDLIM2-202ENST00000308354 ZSWIM1Q9BR11 485 aa23.95■■□□□ 1.42
PDLIM2-202ENST00000308354 KATNAL1Q9BW62 490 aa23.95■■□□□ 1.42
PDLIM2-202ENST00000308354 ACBD3Q9H3P7 528 aa23.95■■□□□ 1.42
PDLIM2-202ENST00000308354 DDX3YO15523 660 aaKnown RBP23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 RAD51CO43502 376 aa23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 RRM1P23921 792 aa23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 TNFRSF8P28908 595 aa23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 POLR2BP30876 1174 aaKnown RBP23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 GUCY2DQ02846 1103 aa23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 ORC1Q13415 861 aa23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 SND1Q7KZF4 910 aaKnown RBP eCLIP23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 SNX17Q15036 470 aa23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 TCEAL1Q15170 157 aa23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 ZNF667Q5HYK9 610 aa23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 DCAF12L1Q5VU92 463 aa23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 SLC27A1Q6PCB7 646 aa23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 RASGEF1CQ8N431 466 aa23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 KIF12Q96FN5 646 aa23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 C11orf70Q9BRQ4 267 aa23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 TRIM7Q9C029 511 aa23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 EPB41L5Q9HCM4 733 aa23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 GDF3Q9NR23 364 aa23.94■■□□□ 1.42
PDLIM2-202ENST00000308354 COMTP21964 271 aa23.93■■□□□ 1.42
PDLIM2-202ENST00000308354 GRM5P41594 1212 aa23.93■■□□□ 1.42
PDLIM2-202ENST00000308354 NOMO3P69849 1222 aa23.93■■□□□ 1.42
PDLIM2-202ENST00000308354 CDC42EP1Q00587 391 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms