RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 PALB2Q86YC2 1186 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 CD302Q8IX05 232 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 EPS8L1Q8TE68 723 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 JAKMIP2Q96AA8 810 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 KIF12Q96FN5 646 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 PACSIN1Q9BY11 444 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 IFIH1Q9BYX4 1025 aaKnown RBP7.47□□□□□ -1.21
PTCD2-201ENST00000308077 PLEKHA5Q9HAU0 1116 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 CNTN3Q9P232 1028 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 NOCTQ9UK39 431 aaKnown RBP7.47□□□□□ -1.21
PTCD2-201ENST00000308077 PADI3Q9ULW8 664 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 DUSP10Q9Y6W6 482 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 SCN1AP35498 2009 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 MEIS3P2A8K0S8 358 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 KRT19P08727 400 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 CHRNB2P17787 502 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 ANXA13P27216 316 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 MAGEA1P43355 309 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 ASPAP45381 313 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 YARSP54577 528 aaKnown RBP7.47□□□□□ -1.21
PTCD2-201ENST00000308077 TRPC3Q13507 836 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 BMS1Q14692 1282 aaKnown RBP7.47□□□□□ -1.21
PTCD2-201ENST00000308077 MBTPS1Q14703 1052 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 ZBTB6Q15916 424 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 SGSM1Q2NKQ1 1148 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 ZNF699Q32M78 642 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 ARHGAP29Q52LW3 1261 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 XKR4Q5GH76 650 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 GLRA4Q5JXX5 417 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 SYT10Q6XYQ8 523 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.47□□□□□ -1.21
PTCD2-201ENST00000308077 ZNF662Q6ZS27 426 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 KIAA1328Q86T90 577 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 NT5DC4Q86YG4 428 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 FMNL3Q8IVF7 1028 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 GLYCTKQ8IVS8 523 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 C18orf25Q96B23 403 aaPredicted RBP7.47□□□□□ -1.21
PTCD2-201ENST00000308077 WDR24Q96S15 920 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 IMPG2Q9BZV3 1241 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 NIF3L1Q9GZT8 377 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 C11orf16Q9NQ32 467 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 KLK14Q9P0G3 267 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 TUBGCP4Q9UGJ1 667 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 PARP2Q9UGN5 583 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 NAGPAQ9UK23 515 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 GUCA1BQ9UMX6 200 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 POLIQ9UNA4 740 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 PRR33A8MZF0 331 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 PPEF2O14830 753 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 GPR182O15218 404 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 PJA2O43164 708 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 CAND2O75155 1236 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 CLSTN1O94985 981 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 IPO7O95373 1038 aaKnown RBP7.46□□□□□ -1.21
PTCD2-201ENST00000308077 CD4P01730 458 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 CCDC172P0C7W6 258 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 KRT5P13647 590 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 CYP11B1P15538 503 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 TBXAS1P24557 533 aaPredicted RBP7.46□□□□□ -1.21
PTCD2-201ENST00000308077 POLR2BP30876 1174 aaKnown RBP7.46□□□□□ -1.21
PTCD2-201ENST00000308077 ETF1P62495 437 aaKnown RBP7.46□□□□□ -1.21
PTCD2-201ENST00000308077 PAK2Q13177 524 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 DSC3Q14574 896 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 CCDC122Q5T0U0 273 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 ALKBH5Q6P6C2 394 aaKnown RBP7.46□□□□□ -1.21
PTCD2-201ENST00000308077 SCARA5Q6ZMJ2 495 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 FAM126BQ8IXS8 530 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 DDX1Q92499 740 aaKnown RBP7.46□□□□□ -1.21
PTCD2-201ENST00000308077 ZNF333Q96JL9 665 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 FAM81BQ96LP2 452 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 PCDHB18PQ96TA0 734 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 AGPAT1Q99943 283 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 CHST12Q9NRB3 414 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 FAM105AQ9NUU6 356 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 DPP3Q9NY33 737 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 TAS2R14Q9NYV8 317 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 SALL4Q9UJQ4 1053 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 ITGA11Q9UKX5 1188 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 CNTN6Q9UQ52 1028 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 DERAQ9Y315 318 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 PCDHB2Q9Y5E7 798 aa7.46□□□□□ -1.21
PTCD2-201ENST00000308077 ANKRD11Q6UB99 2663 aaPredicted RBP7.46□□□□□ -1.22
PTCD2-201ENST00000308077 SMIM28A0A1B0GU29 152 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 FAM170AA1A519 330 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 PTGESO14684 152 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 MMEP08473 750 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 ZNF132P52740 706 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 GNG11P61952 73 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 FMO1Q01740 532 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 SOX4Q06945 474 aaPredicted RBP7.46□□□□□ -1.22
PTCD2-201ENST00000308077 NAB2Q15742 525 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 ZNF697Q5TEC3 545 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 TAF3Q5VWG9 929 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 TMEM270Q6UE05 265 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 RPUSD2Q8IZ73 545 aaKnown RBP7.46□□□□□ -1.22
PTCD2-201ENST00000308077 TDHQ8IZJ6 230 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 U2AF1L4Q8WU68 220 aaKnown RBP7.46□□□□□ -1.22
PTCD2-201ENST00000308077 ZNF592Q92610 1267 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 LPPQ93052 612 aa7.46□□□□□ -1.22
PTCD2-201ENST00000308077 BCO2Q9BYV7 579 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms