RNA–Protein interactions for RNA: ENST00000307588.7

CCDC110-201, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC110, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-201ENST00000307588 NUP85Q9BW27 656 aa17.48■□□□□ 0.39
CCDC110-201ENST00000307588 VRTNQ9H8Y1 702 aa17.48■□□□□ 0.39
CCDC110-201ENST00000307588 RNF14Q9UBS8 474 aa17.48■□□□□ 0.39
CCDC110-201ENST00000307588 GTF2IRD1Q9UHL9 959 aa17.48■□□□□ 0.39
CCDC110-201ENST00000307588 CRYBB1P53674 252 aaPredicted RBP17.48■□□□□ 0.39
CCDC110-201ENST00000307588 WDR72Q3MJ13 1102 aa17.48■□□□□ 0.39
CCDC110-201ENST00000307588 CFAP221Q4G0U5 840 aa17.48■□□□□ 0.39
CCDC110-201ENST00000307588 ZNF394Q53GI3 561 aa17.48■□□□□ 0.39
CCDC110-201ENST00000307588 UBXN11Q5T124 520 aa17.48■□□□□ 0.39
CCDC110-201ENST00000307588 GDF6Q6KF10 455 aaPredicted RBP17.48■□□□□ 0.39
CCDC110-201ENST00000307588 C11orf63Q6NUN7 778 aa17.48■□□□□ 0.39
CCDC110-201ENST00000307588 MON1BQ7L1V2 547 aa17.48■□□□□ 0.39
CCDC110-201ENST00000307588 NME8Q8N427 588 aa17.48■□□□□ 0.39
CCDC110-201ENST00000307588 AMFRQ9UKV5 643 aa17.48■□□□□ 0.39
CCDC110-201ENST00000307588 ALG6Q9Y672 507 aa17.48■□□□□ 0.39
CCDC110-201ENST00000307588 THAP12O43422 761 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 RARBP10826 455 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 GNAT1P11488 350 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 POLR2BP30876 1174 aaKnown RBP17.47■□□□□ 0.39
CCDC110-201ENST00000307588 CDH8P55286 799 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 C2CD6Q53TS8 623 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 LLGL2Q6P1M3 1020 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 ALKAL1Q6UXT8 129 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 CPNE8Q86YQ8 564 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 TFAP2BQ92481 460 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 BTBD6Q96KE9 485 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 SNX27Q96L92 541 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 CCDC94Q9BW85 323 aaPredicted RBP17.47■□□□□ 0.39
CCDC110-201ENST00000307588 NXF3Q9H4D5 531 aaKnown RBP17.47■□□□□ 0.39
CCDC110-201ENST00000307588 RBM12Q9NTZ6 932 aaKnown RBP17.47■□□□□ 0.39
CCDC110-201ENST00000307588 RNF216Q9NWF9 866 aaPredicted RBP17.47■□□□□ 0.39
CCDC110-201ENST00000307588 CNOT8Q9UFF9 292 aaKnown RBP17.47■□□□□ 0.39
CCDC110-201ENST00000307588 RALGAPA2Q2PPJ7 1873 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 PRKAR2AP13861 404 aaKnown RBP17.47■□□□□ 0.39
CCDC110-201ENST00000307588 PTP4A2Q12974 167 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 ZNF667Q5HYK9 610 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 CCDC181Q5TID7 509 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 DCAF12L1Q5VU92 463 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 CCSAPQ6IQ19 270 aaPredicted RBP17.47■□□□□ 0.39
CCDC110-201ENST00000307588 WHAMMQ8TF30 809 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 PBKQ96KB5 322 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 CFHR5Q9BXR6 569 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 SMYD3Q9H7B4 428 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 DPP3Q9NY33 737 aa17.47■□□□□ 0.39
CCDC110-201ENST00000307588 BRD2P25440 801 aaKnown RBP17.46■□□□□ 0.39
CCDC110-201ENST00000307588 AXLP30530 894 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 PAFAH1B1P43034 410 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 RNASE9P60153 205 aaKnown RBP17.46■□□□□ 0.39
CCDC110-201ENST00000307588 ZBTB6Q15916 424 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 MTERF4Q7Z6M4 381 aaKnown RBP17.46■□□□□ 0.39
CCDC110-201ENST00000307588 CD302Q8IX05 232 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 KLHDC9Q8NEP7 349 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 ZNF564Q8TBZ8 553 aaPredicted RBP17.46■□□□□ 0.39
CCDC110-201ENST00000307588 KIF12Q96FN5 646 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 CALR3Q96L12 384 aaKnown RBP17.46■□□□□ 0.39
CCDC110-201ENST00000307588 PLEKHA5Q9HAU0 1116 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 CREBZFQ9NS37 354 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 AGAP1Q9UPQ3 857 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 RRM1P23921 792 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 ATICP31939 592 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 VSNL1P62760 191 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 TAF2Q6P1X5 1199 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 TRIM72Q6ZMU5 477 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 NT5DC4Q86YG4 428 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 FAXDC2Q96IV6 333 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 CELF4Q9BZC1 486 aaKnown RBP17.46■□□□□ 0.39
CCDC110-201ENST00000307588 XPNPEP3Q9NQH7 507 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 UVRAGQ9P2Y5 699 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 ITGA11Q9UKX5 1188 aa17.46■□□□□ 0.39
CCDC110-201ENST00000307588 PIN4Q9Y237 131 aaKnown RBP17.46■□□□□ 0.39
CCDC110-201ENST00000307588 REM2Q8IYK8 340 aaPredicted RBP17.46■□□□□ 0.38
CCDC110-201ENST00000307588 AVENQ9NQS1 362 aaPredicted RBP17.46■□□□□ 0.38
CCDC110-201ENST00000307588 RNF19AQ9NV58 838 aa17.46■□□□□ 0.38
CCDC110-201ENST00000307588 TMEM59LQ9UK28 342 aa17.46■□□□□ 0.38
CCDC110-201ENST00000307588 GRIN2DO15399 1336 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 TRPA1O75762 1119 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 MESDQ14696 234 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 PHLDB2Q86SQ0 1253 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 FAM228AQ86W67 206 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 PHF13Q86YI8 300 aaPredicted RBP17.45■□□□□ 0.38
CCDC110-201ENST00000307588 RASGEF1CQ8N431 466 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 CD99L2Q8TCZ2 262 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 ACTRT1Q8TDG2 376 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 ALG3Q92685 438 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 HPDLQ96IR7 371 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 TWNKQ96RR1 684 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 TRIM7Q9C029 511 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 RNF39Q9H2S5 420 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 HMGXB4Q9UGU5 601 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 SRRDQ9UH36 339 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 THSD7BQ9C0I4 1608 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 SEC31AO94979 1220 aaKnown RBP17.45■□□□□ 0.38
CCDC110-201ENST00000307588 ZRANB2O95218 330 aaKnown RBP eCLIP17.45■□□□□ 0.38
CCDC110-201ENST00000307588 COMTP21964 271 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 AKAP5P24588 427 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 NSFP46459 744 aaKnown RBP17.45■□□□□ 0.38
CCDC110-201ENST00000307588 RAD23BP54727 409 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 KCNA10Q16322 511 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 SMYD5Q6GMV2 418 aa17.45■□□□□ 0.38
CCDC110-201ENST00000307588 CC2D1AQ6P1N0 951 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms