RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 TRPV2Q9Y5S1 764 aa11.27□□□□□ -0.6
SYNPO2-201ENST00000307142 SPTLC1O15269 473 aa11.27□□□□□ -0.6
SYNPO2-201ENST00000307142 CABYRO75952 493 aa11.27□□□□□ -0.6
SYNPO2-201ENST00000307142 RAB27AP51159 221 aa11.27□□□□□ -0.6
SYNPO2-201ENST00000307142 EFHC1Q5JVL4 640 aa11.27□□□□□ -0.6
SYNPO2-201ENST00000307142 KCTD16Q68DU8 428 aa11.27□□□□□ -0.6
SYNPO2-201ENST00000307142 RIOX2Q8IUF8 465 aa11.27□□□□□ -0.6
SYNPO2-201ENST00000307142 TRIM48Q8IWZ4 208 aa11.27□□□□□ -0.6
SYNPO2-201ENST00000307142 FOPNLQ96NB1 174 aa11.27□□□□□ -0.6
SYNPO2-201ENST00000307142 STK33Q9BYT3 514 aa11.27□□□□□ -0.6
SYNPO2-201ENST00000307142 WDCPQ9H6R7 721 aa11.27□□□□□ -0.6
SYNPO2-201ENST00000307142 MID2Q9UJV3 735 aa11.27□□□□□ -0.6
SYNPO2-201ENST00000307142 PODXLO00592 558 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 OGTO15294 1046 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 OAS2P29728 719 aaKnown RBP11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 MAP3K7CLP57077 242 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 PPM1LQ5SGD2 360 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 MMS22LQ6ZRQ5 1243 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 CD302Q8IX05 232 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 REPS2Q8NFH8 660 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 NIF3L1Q9GZT8 377 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 G3BP2Q9UN86 482 aaKnown RBP11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 DDHD2O94830 711 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 PRKAR2AP13861 404 aaKnown RBP11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 NUMBP49757 651 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 MAP2K5Q13163 448 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 ADCK2Q7Z695 626 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 NECAB2Q7Z6G3 386 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 WDR35Q9P2L0 1181 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 FAM198AQ9UFP1 575 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 MROH1Q8NDA8 1641 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 CCDC144BQ3MJ40 725 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 HS6ST3Q8IZP7 471 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 ATP8B4Q8TF62 1192 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 OGFRQ9NZT2 677 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 GNGT2O14610 69 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 CTNNB1P35222 781 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 OCRLQ01968 901 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 MIB1Q86YT6 1006 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 METTL5Q9NRN9 209 aaKnown RBP11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 TRPM5Q9NZQ8 1165 aa11.27□□□□□ -0.61
SYNPO2-201ENST00000307142 TTC4O95801 387 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 NCF2P19878 526 aaPredicted RBP11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 TROAPQ12815 778 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 POLD3Q15054 466 aaPredicted RBP11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 SYCP2LQ5T4T6 812 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 ACOT1Q86TX2 421 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 APBA2Q99767 749 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 PDCD2LQ9BRP1 358 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 COG4Q9H9E3 785 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 MED24O75448 989 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 HOXC6P09630 235 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 MEI1Q5TIA1 1274 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 CES5AQ6NT32 575 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 DAGLBQ8NCG7 672 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 INTS9Q9NV88 658 aaKnown RBP11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 ITIH6Q6UXX5 1313 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 F5H5T6 163 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 RALBP11234 206 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 RAP1GAPP47736 663 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 SOX10P56693 466 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 TAF2Q6P1X5 1199 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 TBC1D19Q8N5T2 526 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 TRAPPC12Q8WVT3 735 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 CINPQ9BW66 212 aaPredicted RBP11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 VPS11Q9H270 941 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 TAF1DQ9H5J8 278 aaPredicted RBP11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 TCRBV5S4A2TA0A5A2 114 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 SLC15A5A6NIM6 579 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 ASS1P00966 412 aaKnown RBP11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 LHX1P48742 406 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 MDH1BQ5I0G3 518 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 REM2Q8IYK8 340 aaPredicted RBP11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 DDI1Q8WTU0 396 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 ATXN7L3BQ96GX2 97 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 HERC6Q8IVU3 1022 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 C10orf67Q8IYJ2 551 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 MRPL9Q9BYD2 267 aaKnown RBP11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 GPR63Q9BZJ6 419 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 KRT82Q9NSB4 513 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 TLL1O43897 1013 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 ACO1P21399 889 aaKnown RBP11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 NPTX2P47972 431 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 DPYDQ12882 1025 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 PIGHQ14442 188 aaPredicted RBP11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 PYCARDQ9ULZ3 195 aa11.26□□□□□ -0.61
SYNPO2-201ENST00000307142 ELNP15502 786 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 NAA25Q14CX7 972 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 KCTD17Q8N5Z5 321 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 ZNF212Q9UDV6 495 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 WTIPA6NIX2 430 aaPredicted RBP11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 XYLBO75191 536 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 KCNA1Q09470 495 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 PTK2BQ14289 1009 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 MAP3K21Q5TCX8 1036 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 MFN1Q8IWA4 741 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 NKX2-3Q8TAU0 364 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 CENPKQ9BS16 269 aa11.25□□□□□ -0.61
SYNPO2-201ENST00000307142 HAUS8Q9BT25 410 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms