RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 FNIP2Q9P278 1114 aa11.86□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 DPP7Q9UHL4 492 aa11.86□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 DSEQ9UL01 958 aa11.86□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 PTPRJQ12913 1337 aa11.86□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 C2orf16Q68DN1 1984 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 LRRIQ3A6PVS8 624 aaPredicted RBP11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 AKAP3O75969 853 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 GLUD1P00367 558 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 CNPP09543 421 aaKnown RBP11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 BMP6P22004 513 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 KCNA5P22460 613 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 AARSP49588 968 aaKnown RBP eCLIP11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 PMS1P54277 932 aaKnown RBP11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 LILRA4P59901 499 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 YWHAHQ04917 246 aaPredicted RBP11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 TPD52L1Q16890 204 aaPredicted RBP11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 CCDC40Q4G0X9 1142 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 VARS2Q5ST30 1063 aaKnown RBP11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 TCERG1LQ5VWI1 586 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 CD300LGQ6UXG3 332 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 TRAPPC11Q7Z392 1133 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 METTL23Q86XA0 190 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 MLKLQ8NB16 471 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 PARD3BQ8TEW8 1205 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 SENP8Q96LD8 212 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 CEP63Q96MT8 703 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 POP1Q99575 1024 aaKnown RBP11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 RXFP1Q9HBX9 757 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 DZANK1Q9NVP4 752 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 MTRRQ9UBK8 725 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 HCFC2Q9Y5Z7 792 aa11.85□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 KPNA7A9QM74 516 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 PPP1R3GB7ZBB8 358 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 M0QZQ0 153 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 CYB561D2O14569 222 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 TEX28O15482 410 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 LINC01565O15544 149 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 STX10O60499 249 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 LILRB3O75022 631 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 RPL17P18621 184 aaKnown RBP11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 TYMPP19971 482 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 PIK3CAP42336 1068 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 CLCN4P51793 760 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 STX17P56962 302 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 NLRP12P59046 1061 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 ENPEPQ07075 957 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 ADAM15Q13444 863 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 CTXN3Q4LDR2 81 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 DCAF17Q5H9S7 520 aaPredicted RBP11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 OVOS1Q6IE37 1185 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 FOXR2Q6PJQ5 311 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 SASS6Q6UVJ0 657 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 LNX1Q8TBB1 728 aaPredicted RBP11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 EEF2KMTQ96G04 330 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 HPDLQ96IR7 371 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 FAM84AQ96KN4 292 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 OXCT2Q9BYC2 517 aaPredicted RBP11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 IMPG2Q9BZV3 1241 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 MMRN2Q9H8L6 949 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 PRDM6Q9NQX0 595 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 RWDD2AQ9UIY3 292 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 BARX2Q9UMQ3 279 aaPredicted RBP11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 BACE2Q9Y5Z0 518 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 CDY1Q9Y6F8 540 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 MYH10P35580 1976 aa11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 TCF20Q9UGU0 1960 aaKnown RBP11.84□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 BRWD1Q9NSI6 2320 aa11.83□□□□□ -0.51
CSPG4P2Y-201ENST00000306853 IKBKBO14920 756 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 HUS1O60921 280 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 TBX10O75333 385 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 GLP2RO95838 553 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 TRIM49P0CI25 452 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 TRIM49CP0CI26 452 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 CPB1P15086 417 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 IGFBP6P24592 240 aaPredicted RBP11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 ATICP31939 592 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 TNNC1P63316 161 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 COL19A1Q14993 1142 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 CTC1Q2NKJ3 1217 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 TTI2Q6NXR4 508 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 PALB2Q86YC2 1186 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 ZC3H3Q8IXZ2 948 aaKnown RBP11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 THEM5Q8N1Q8 247 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 CCDC150Q8NCX0 1101 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 PLEKHO2Q8TD55 490 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 ATXN2LQ8WWM7 1075 aaKnown RBP11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 METTL14Q9HCE5 456 aaKnown RBP11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 MAN1C1Q9NR34 630 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 ARMCX3Q9UH62 379 aaPredicted RBP11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 SIX4Q9UIU6 781 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 CD207Q9UJ71 328 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 FAM50BQ9Y247 325 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 TIMM13Q9Y5L4 95 aaPredicted RBP11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 SNX9Q9Y5X1 595 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 TRANK1O15050 2925 aa11.83□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.82□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 H3BQ06 376 aaPredicted RBP11.82□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 SPTLC1O15269 473 aa11.82□□□□□ -0.52
CSPG4P2Y-201ENST00000306853 GNA14O95837 355 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms