RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 AKAP3O75969 853 aa11.06□□□□□ -0.64
COL4A3-201ENST00000304990 LYPLA2O95372 231 aa11.06□□□□□ -0.64
COL4A3-201ENST00000304990 PSMA5P28066 241 aa11.06□□□□□ -0.64
COL4A3-201ENST00000304990 MARCKSP29966 332 aaPredicted RBP11.06□□□□□ -0.64
COL4A3-201ENST00000304990 MCM4P33991 863 aa11.06□□□□□ -0.64
COL4A3-201ENST00000304990 EPHB3P54753 998 aa11.06□□□□□ -0.64
COL4A3-201ENST00000304990 OSTNP61366 133 aa11.06□□□□□ -0.64
COL4A3-201ENST00000304990 RING1Q06587 406 aa11.06□□□□□ -0.64
COL4A3-201ENST00000304990 GRSF1Q12849 480 aaKnown RBP eCLIP11.06□□□□□ -0.64
COL4A3-201ENST00000304990 ARHGAP15Q53QZ3 475 aa11.06□□□□□ -0.64
COL4A3-201ENST00000304990 PLA2G2CQ5R387 149 aa11.06□□□□□ -0.64
COL4A3-201ENST00000304990 EEF1DP3Q658K8 133 aa11.06□□□□□ -0.64
COL4A3-201ENST00000304990 CDCA2Q69YH5 1023 aaPredicted RBP11.06□□□□□ -0.64
COL4A3-201ENST00000304990 LRSAM1Q6UWE0 723 aa11.06□□□□□ -0.64
COL4A3-201ENST00000304990 FAM177A1Q8N128 213 aaPredicted RBP11.06□□□□□ -0.64
COL4A3-201ENST00000304990 SHKBP1Q8TBC3 707 aa11.06□□□□□ -0.64
COL4A3-201ENST00000304990 KIF12Q96FN5 646 aa11.06□□□□□ -0.64
COL4A3-201ENST00000304990 AIFM3Q96NN9 605 aa11.06□□□□□ -0.64
COL4A3-201ENST00000304990 THG1LQ9NWX6 298 aaKnown RBP11.06□□□□□ -0.64
COL4A3-201ENST00000304990 AFF4Q9UHB7 1163 aaKnown RBP11.06□□□□□ -0.64
COL4A3-201ENST00000304990 F5P12259 2224 aa11.06□□□□□ -0.64
COL4A3-201ENST00000304990 NCANO14594 1321 aa11.06□□□□□ -0.64
COL4A3-201ENST00000304990 CCDC163A0A0D9SF12 145 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 SMIM28A0A1B0GU29 152 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 CAVIN2O95810 425 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 GBP1P32455 592 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 TXKP42681 527 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 ALDH1A3P47895 512 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 FCHO2Q0JRZ9 810 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 STK3Q13188 491 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 CCINQ13939 588 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 PPP2R5AQ15172 486 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 CALCRLQ16602 461 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 ATF7IP2Q5U623 682 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 CD300LGQ6UXG3 332 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 ARID3BQ8IVW6 561 aaPredicted RBP11.05□□□□□ -0.64
COL4A3-201ENST00000304990 APPL2Q8NEU8 664 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 RSPRY1Q96DX4 576 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 PGLYRP2Q96PD5 576 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 TMEM209Q96SK2 561 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 SCNM1Q9BWG6 230 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 ATXN3LQ9H3M9 355 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 MAFFQ9ULX9 164 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 YIPF1Q9Y548 306 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 SNX14Q9Y5W7 946 aa11.05□□□□□ -0.64
COL4A3-201ENST00000304990 ARHGEF35A5YM69 484 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 KHNYNO15037 678 aaKnown RBP11.04□□□□□ -0.64
COL4A3-201ENST00000304990 TOP3BO95985 862 aaKnown RBP11.04□□□□□ -0.64
COL4A3-201ENST00000304990 XRCC6P12956 609 aaKnown RBP eCLIP11.04□□□□□ -0.64
COL4A3-201ENST00000304990 NAMPTP43490 491 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 EPHA5P54756 1037 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 PLCB2Q00722 1185 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 TNK2Q07912 1038 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 KARSQ15046 597 aaKnown RBP11.04□□□□□ -0.64
COL4A3-201ENST00000304990 NPY5RQ15761 445 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 UAP1L1Q3KQV9 507 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 ITPRIPL2Q3MIP1 535 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 PLK5Q496M5 336 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 WDR44Q5JSH3 913 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 STXBP5Q5T5C0 1151 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 GPR158Q5T848 1215 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 KIAA1211LQ6NV74 962 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 RNF19BQ6ZMZ0 732 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 CAMKK1Q8N5S9 505 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 BPIFB1Q8TDL5 484 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 DDX12PQ92771 950 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 ZC3H10Q96K80 434 aaKnown RBP11.04□□□□□ -0.64
COL4A3-201ENST00000304990 IFT74Q96LB3 600 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 HHIPQ96QV1 700 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 NACC1Q96RE7 527 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 HSD17B14Q9BPX1 270 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 TTC12Q9H892 705 aaPredicted RBP11.04□□□□□ -0.64
COL4A3-201ENST00000304990 TMEM9BQ9NQ34 198 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 DAXXQ9UER7 740 aaPredicted RBP11.04□□□□□ -0.64
COL4A3-201ENST00000304990 TPCN1Q9ULQ1 816 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 ATRXP46100 2492 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 CNOT1A5YKK6 2376 aaKnown RBP11.04□□□□□ -0.64
COL4A3-201ENST00000304990 CITO14578 2027 aa11.04□□□□□ -0.64
COL4A3-201ENST00000304990 SDK1Q7Z5N4 2213 aa11.03□□□□□ -0.64
COL4A3-201ENST00000304990 CDC45O75419 566 aa11.03□□□□□ -0.64
COL4A3-201ENST00000304990 CDKL5O76039 1030 aa11.03□□□□□ -0.64
COL4A3-201ENST00000304990 FGF19O95750 216 aa11.03□□□□□ -0.64
COL4A3-201ENST00000304990 CEACAM1P13688 526 aa11.03□□□□□ -0.64
COL4A3-201ENST00000304990 EFNA5P52803 228 aa11.03□□□□□ -0.64
COL4A3-201ENST00000304990 AMPD2Q01433 879 aa11.03□□□□□ -0.64
COL4A3-201ENST00000304990 SOX4Q06945 474 aaPredicted RBP11.03□□□□□ -0.64
COL4A3-201ENST00000304990 ZNF568Q3ZCX4 644 aa11.03□□□□□ -0.64
COL4A3-201ENST00000304990 PKN3Q6P5Z2 889 aa11.03□□□□□ -0.64
COL4A3-201ENST00000304990 FBXL16Q8N461 479 aa11.03□□□□□ -0.64
COL4A3-201ENST00000304990 BSNDQ8WZ55 320 aa11.03□□□□□ -0.64
COL4A3-201ENST00000304990 GCNAQ96QF7 691 aa11.03□□□□□ -0.64
COL4A3-201ENST00000304990 LARP6Q9BRS8 491 aaKnown RBP11.03□□□□□ -0.64
COL4A3-201ENST00000304990 TCHPQ9BT92 498 aa11.03□□□□□ -0.64
COL4A3-201ENST00000304990 AGXT2Q9BYV1 514 aa11.03□□□□□ -0.64
COL4A3-201ENST00000304990 BRMS1Q9HCU9 246 aa11.03□□□□□ -0.64
COL4A3-201ENST00000304990 ATG2BQ96BY7 2078 aa11.03□□□□□ -0.64
COL4A3-201ENST00000304990 ZNF638Q14966 1978 aaKnown RBP11.03□□□□□ -0.64
COL4A3-201ENST00000304990 NUP205Q92621 2012 aa11.02□□□□□ -0.64
COL4A3-201ENST00000304990 LNP1A1A4G5 178 aa11.02□□□□□ -0.65
COL4A3-201ENST00000304990 K7ERI5 159 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms