RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 C18orf8Q96DM3 657 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 FOPNLQ96NB1 174 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 JPH1Q9HDC5 661 aaPredicted RBP8□□□□□ -1.13
SF3B3-201ENST00000302516 ZCCHC17Q9NP64 241 aaKnown RBP8□□□□□ -1.13
SF3B3-201ENST00000302516 ZNF609O15014 1411 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 RALAP11233 206 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 HMOX2P30519 316 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 OLFML2BQ68BL8 750 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 TRAF7Q6Q0C0 670 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 DDX42Q86XP3 938 aaKnown RBP eCLIP8□□□□□ -1.13
SF3B3-201ENST00000302516 ADGRF4Q8IZF3 695 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 NR1H4Q96RI1 486 aaPredicted RBP8□□□□□ -1.13
SF3B3-201ENST00000302516 DHX35Q9H5Z1 703 aaKnown RBP8□□□□□ -1.13
SF3B3-201ENST00000302516 DCLRE1BQ9H816 532 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 HSPBP1Q9NZL4 362 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 DCDC2Q9UHG0 476 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 COL15A1P39059 1388 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 KAT6AQ92794 2004 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 PHF20L1A8MW92 1017 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 UCHL3P15374 230 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 EIF2AK2P19525 551 aaKnown RBP8□□□□□ -1.13
SF3B3-201ENST00000302516 FDFT1P37268 417 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 OSTNP61366 133 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 RAD51Q06609 339 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 TTC23LQ6PF05 361 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 HERC5Q9UII4 1024 aaKnown RBP8□□□□□ -1.13
SF3B3-201ENST00000302516 LMTK2Q8IWU2 1503 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 LZTS3O60299 673 aaPredicted RBP8□□□□□ -1.13
SF3B3-201ENST00000302516 TLR2O60603 784 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 LONRF1Q17RB8 773 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 CYP2D7A0A087X1C5 515 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 STX5Q13190 355 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 PTPRN2Q92932 1015 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 TMA16Q96EY4 203 aaKnown RBP7.99□□□□□ -1.13
SF3B3-201ENST00000302516 HIC2Q96JB3 615 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 TMEM245Q9H330 911 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 ROBO2Q9HCK4 1378 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 A8MXQ7 604 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 KIF28PB7ZC32 967 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 DFFAO00273 331 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 OCM2P0CE71 109 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 OCMP0CE72 109 aaPredicted RBP7.99□□□□□ -1.13
SF3B3-201ENST00000302516 CTCFP49711 727 aaPredicted RBP7.99□□□□□ -1.13
SF3B3-201ENST00000302516 PURAQ00577 322 aaKnown RBP7.99□□□□□ -1.13
SF3B3-201ENST00000302516 PRKG1Q13976 671 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 TC2NQ8N9U0 490 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 TEKT4Q8WW24 435 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 SAC3D1A6NKF1 404 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 RAD51CO43502 376 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 TOMM70O94826 608 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 MUTP22033 750 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 NNMTP40261 264 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 SCFD2Q8WU76 684 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 CAVIN3Q969G5 261 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 CNDP1Q96KN2 507 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 SEC31BQ9NQW1 1179 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 WDR70Q9NW82 654 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 CES2O00748 559 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 ALBP02768 609 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 ADRA2BP18089 450 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 YWHABP31946 246 aaKnown RBP7.99□□□□□ -1.13
SF3B3-201ENST00000302516 CLK1P49759 484 aaKnown RBP7.99□□□□□ -1.13
SF3B3-201ENST00000302516 KCNK10P57789 538 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 WASHC5Q12768 1159 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 PDAP1Q13442 181 aaKnown RBP7.99□□□□□ -1.13
SF3B3-201ENST00000302516 SPDYCQ5MJ68 293 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 NLRP9Q7RTR0 991 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 NOP9Q86U38 636 aaKnown RBP7.99□□□□□ -1.13
SF3B3-201ENST00000302516 OR6P1Q8NGX9 317 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 THTPAQ9BU02 230 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 MYH15Q9Y2K3 1946 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 hCG_2014768A0A024R1R8 64 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 GOLGA8RI6L899 631 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 SLC9A1P19634 815 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 HNRNPH1P31943 449 aaKnown RBP7.99□□□□□ -1.13
SF3B3-201ENST00000302516 MAGEA4P43358 317 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 TJAP1Q5JTD0 557 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 C1orf228Q6PIY5 440 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 PI16Q6UXB8 463 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 MRPS26Q9BYN8 205 aaKnown RBP7.99□□□□□ -1.13
SF3B3-201ENST00000302516 PABPC3Q9H361 631 aaKnown RBP7.99□□□□□ -1.13
SF3B3-201ENST00000302516 IGSF9BQ9UPX0 1349 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 GYPCP04921 128 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 PKN2Q16513 984 aaKnown RBP7.99□□□□□ -1.13
SF3B3-201ENST00000302516 BBS7Q8IWZ6 715 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 C17orf80Q9BSJ5 609 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 UNC45AQ9H3U1 944 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 TMEM8AQ9HCN3 771 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 ADAM30Q9UKF2 790 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 ZBTB1Q9Y2K1 713 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 ZBTB12Q9Y330 459 aaPredicted RBP7.99□□□□□ -1.13
SF3B3-201ENST00000302516 SCTRP47872 440 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 SERPINB8P50452 374 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 SGSM1Q2NKQ1 1148 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 KHDRBS2Q5VWX1 349 aaKnown RBP7.99□□□□□ -1.13
SF3B3-201ENST00000302516 PRMT9Q6P2P2 845 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 SUGP1Q8IWZ8 645 aaKnown RBP7.99□□□□□ -1.13
SF3B3-201ENST00000302516 CASS4Q9NQ75 786 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 PCMTD2Q9NV79 361 aa7.99□□□□□ -1.13
SF3B3-201ENST00000302516 A0A0A6YYK5 440 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms