RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 GPRASP2Q96D09 838 aa20.3■□□□□ 0.84
TSR1-201ENST00000301364 SGPL1O95470 568 aa20.3■□□□□ 0.84
TSR1-201ENST00000301364 SLC4A1P02730 911 aa20.3■□□□□ 0.84
TSR1-201ENST00000301364 TMEM119Q4V9L6 283 aa20.3■□□□□ 0.84
TSR1-201ENST00000301364 LVRNQ6Q4G3 990 aa20.3■□□□□ 0.84
TSR1-201ENST00000301364 C4orf22Q6V702 233 aa20.3■□□□□ 0.84
TSR1-201ENST00000301364 ARMC2Q8NEN0 867 aa20.3■□□□□ 0.84
TSR1-201ENST00000301364 MMP19Q99542 508 aa20.3■□□□□ 0.84
TSR1-201ENST00000301364 PI4K2AQ9BTU6 479 aa20.3■□□□□ 0.84
TSR1-201ENST00000301364 IL18RAPO95256 599 aa20.3■□□□□ 0.84
TSR1-201ENST00000301364 GPAT2Q6NUI2 795 aa20.3■□□□□ 0.84
TSR1-201ENST00000301364 SPATA18Q8TC71 538 aa20.3■□□□□ 0.84
TSR1-201ENST00000301364 ATP8B4Q8TF62 1192 aa20.3■□□□□ 0.84
TSR1-201ENST00000301364 AENQ8WTP8 325 aaKnown RBP20.3■□□□□ 0.84
TSR1-201ENST00000301364 AGBL1Q96MI9 1066 aa20.3■□□□□ 0.84
TSR1-201ENST00000301364 RGL2O15211 777 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 APOEP02649 317 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 BMP6P22004 513 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 PTENP60484 403 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 DYNC1I2Q13409 638 aaKnown RBP20.29■□□□□ 0.84
TSR1-201ENST00000301364 ADAM33Q9BZ11 813 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 CHORDC1Q9UHD1 332 aaPredicted RBP20.29■□□□□ 0.84
TSR1-201ENST00000301364 CHMP2BQ9UQN3 213 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 GEMIN4P57678 1058 aaKnown RBP20.29■□□□□ 0.84
TSR1-201ENST00000301364 IL1RL1Q01638 556 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 YWHAHQ04917 246 aaPredicted RBP20.29■□□□□ 0.84
TSR1-201ENST00000301364 KDSRQ06136 332 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 MAPRE2Q15555 327 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 EPC2Q52LR7 807 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 ZNF280CQ8ND82 737 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 MAP3K20Q9NYL2 800 aaKnown RBP20.29■□□□□ 0.84
TSR1-201ENST00000301364 IGF2BP3O00425 579 aaKnown RBP eCLIP20.29■□□□□ 0.84
TSR1-201ENST00000301364 ICAM1P05362 532 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 CYP11B1P15538 503 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 RABGAP1LQ5R372 815 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 ZDHHC15Q96MV8 337 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 TRIM62Q9BVG3 475 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 FRMD8P1Q9BZ68 369 aaPredicted RBP20.29■□□□□ 0.84
TSR1-201ENST00000301364 ENO1P06733 434 aaKnown RBP20.29■□□□□ 0.84
TSR1-201ENST00000301364 C11orf63Q6NUN7 778 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 EXT2Q93063 718 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 OSGEPQ9NPF4 335 aa20.29■□□□□ 0.84
TSR1-201ENST00000301364 CHRNA5P30532 468 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 SESN2P58004 480 aaPredicted RBP20.28■□□□□ 0.84
TSR1-201ENST00000301364 MKRN4PQ13434 485 aaPredicted RBP20.28■□□□□ 0.84
TSR1-201ENST00000301364 CUL2Q13617 745 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 EFTUD2Q15029 972 aaKnown RBP eCLIP20.28■□□□□ 0.843e-7■■■■□ 22.3
TSR1-201ENST00000301364 RARS2Q5T160 578 aaKnown RBP20.28■□□□□ 0.84
TSR1-201ENST00000301364 CREG2Q8IUH2 290 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 GMCL1P1Q8NEA9 526 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 FAM118BQ9BPY3 351 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 KLC1Q07866 573 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 TMC2Q8TDI7 906 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 INTS13Q9NVM9 706 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 ZNF446Q9NWS9 450 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 L3MBTL1Q9Y468 752 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 CAND2O75155 1236 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 CATSPER1Q8NEC5 780 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 ZNF507Q8TCN5 953 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 SMARCAD1Q9H4L7 1026 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 ANLNQ9NQW6 1124 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 JCADQ9P266 1359 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 WEE2P0C1S8 567 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 STMN1P16949 149 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 RPS6P62753 249 aaKnown RBP20.28■□□□□ 0.84
TSR1-201ENST00000301364 TSPY1Q01534 308 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 POU5F1BQ06416 359 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 NME3Q13232 169 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 MSL3Q8N5Y2 521 aaKnown RBP20.28■□□□□ 0.84
TSR1-201ENST00000301364 SAMD3Q8N6K7 520 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 EPS8L3Q8TE67 593 aaKnown RBP20.28■□□□□ 0.84
TSR1-201ENST00000301364 PGBD4Q96DM1 585 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 ZBTB18Q99592 522 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 TRPV6Q9H1D0 765 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 NOD2Q9HC29 1040 aa20.28■□□□□ 0.84
TSR1-201ENST00000301364 POLRMTO00411 1230 aaKnown RBP20.27■□□□□ 0.84
TSR1-201ENST00000301364 STIP1P31948 543 aaKnown RBP20.27■□□□□ 0.84
TSR1-201ENST00000301364 ALDH18A1P54886 795 aaKnown RBP20.27■□□□□ 0.84
TSR1-201ENST00000301364 ADA2Q9NZK5 511 aa20.27■□□□□ 0.84
TSR1-201ENST00000301364 CUL3Q13618 768 aa20.27■□□□□ 0.84
TSR1-201ENST00000301364 IER5Q5VY09 327 aa20.27■□□□□ 0.84
TSR1-201ENST00000301364 CBWD2Q8IUF1 395 aa20.27■□□□□ 0.84
TSR1-201ENST00000301364 KIF2BQ8N4N8 673 aa20.27■□□□□ 0.84
TSR1-201ENST00000301364 TEX9Q8N6V9 391 aa20.27■□□□□ 0.84
TSR1-201ENST00000301364 CCDC124Q96CT7 223 aaKnown RBP20.27■□□□□ 0.84
TSR1-201ENST00000301364 MANSC1Q9H8J5 431 aa20.27■□□□□ 0.84
TSR1-201ENST00000301364 BLOC1S4Q9NUP1 217 aa20.27■□□□□ 0.84
TSR1-201ENST00000301364 POLLQ9UGP5 575 aa20.27■□□□□ 0.84
TSR1-201ENST00000301364 CNOT7Q9UIV1 285 aaKnown RBP20.27■□□□□ 0.84
TSR1-201ENST00000301364 TXNP10599 105 aaKnown RBP20.27■□□□□ 0.84
TSR1-201ENST00000301364 IL1R1P14778 569 aa20.27■□□□□ 0.84
TSR1-201ENST00000301364 GARTP22102 1010 aa20.27■□□□□ 0.84
TSR1-201ENST00000301364 TMEM132DQ14C87 1099 aa20.27■□□□□ 0.84
TSR1-201ENST00000301364 EIF1ADQ8N9N8 165 aaKnown RBP20.27■□□□□ 0.84
TSR1-201ENST00000301364 F5H423 210 aaPredicted RBP20.27■□□□□ 0.83
TSR1-201ENST00000301364 KLHL2O95198 593 aa20.27■□□□□ 0.83
TSR1-201ENST00000301364 CBWD1Q9BRT8 395 aa20.27■□□□□ 0.83
TSR1-201ENST00000301364 TARS2Q9BW92 718 aaKnown RBP20.27■□□□□ 0.83
TSR1-201ENST00000301364 FNDC3AQ9Y2H6 1198 aaKnown RBP20.27■□□□□ 0.83
TSR1-201ENST00000301364 ARHGAP10A1A4S6 786 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms