RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ANKRD42Q8N9B4 389 aa13.71□□□□□ -0.22
HIF3A-204ENST00000300862 N4BP2L2Q92802 583 aaPredicted RBP13.71□□□□□ -0.22
HIF3A-204ENST00000300862 ARHGEF2Q92974 986 aaKnown RBP13.71□□□□□ -0.22
HIF3A-204ENST00000300862 ACSF2Q96CM8 615 aaPredicted RBP13.71□□□□□ -0.22
HIF3A-204ENST00000300862 FAM212AQ96EL1 285 aa13.71□□□□□ -0.22
HIF3A-204ENST00000300862 SGSM3Q96HU1 749 aa13.71□□□□□ -0.22
HIF3A-204ENST00000300862 SCLT1Q96NL6 688 aa13.71□□□□□ -0.22
HIF3A-204ENST00000300862 ANAPC5Q9UJX4 755 aa13.71□□□□□ -0.22
HIF3A-204ENST00000300862 TLR3O15455 904 aaKnown RBP13.7□□□□□ -0.22
HIF3A-204ENST00000300862 ZBTB7AO95365 584 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 GAS8O95995 478 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 CST3P01034 146 aaPredicted RBP13.7□□□□□ -0.22
HIF3A-204ENST00000300862 ITIH2P19823 946 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 TNFSF9P41273 254 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 SLC1A1P43005 524 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 NOP14P78316 857 aaKnown RBP13.7□□□□□ -0.22
HIF3A-204ENST00000300862 GNPTABQ3T906 1256 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 ZNF568Q3ZCX4 644 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 ANGEL2Q5VTE6 544 aaKnown RBP13.7□□□□□ -0.22
HIF3A-204ENST00000300862 TRMT10CQ7L0Y3 403 aaKnown RBP13.7□□□□□ -0.22
HIF3A-204ENST00000300862 ZBTB33Q86T24 672 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 SLCO2A1Q92959 643 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 C9orf72Q96LT7 481 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 TMEM109Q9BVC6 243 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 OSBPL8Q9BZF1 889 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 PORCNQ9H237 461 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 GGT7Q9UJ14 662 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 CD2APQ9Y5K6 639 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 KIF1CO43896 1103 aaKnown RBP13.7□□□□□ -0.22
HIF3A-204ENST00000300862 OATP04181 439 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 FDX1P10109 184 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 BPIFB4P59827 614 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 PTK6Q13882 451 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 DALRD3Q5D0E6 543 aaKnown RBP13.7□□□□□ -0.22
HIF3A-204ENST00000300862 TNFAIP8L3Q5GJ75 292 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 HP1BP3Q5SSJ5 553 aaPredicted RBP13.7□□□□□ -0.22
HIF3A-204ENST00000300862 LIN9Q5TKA1 542 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 DLK2Q6UY11 383 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 EEPD1Q7L9B9 569 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 GLIS1Q8NBF1 620 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 CCDC197Q8NCU1 140 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 ATL2Q8NHH9 583 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 CCT6BQ92526 530 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 ZNF668Q96K58 619 aaPredicted RBP13.7□□□□□ -0.22
HIF3A-204ENST00000300862 KIAA1586Q9HCI6 787 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 KCNK9Q9NPC2 374 aa13.7□□□□□ -0.22
HIF3A-204ENST00000300862 NFASCO94856 1347 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 TMEM120BA0PK00 339 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 TTC4O95801 387 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 CLTAP09496 248 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 ZSCAN5DPP0CG00 497 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 MYBL1P10243 752 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 KLF1Q13351 362 aaPredicted RBP13.69□□□□□ -0.22
HIF3A-204ENST00000300862 NCOA4Q13772 614 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 DCAF15Q66K64 600 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 GSTA5Q7RTV2 222 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 CEP57Q86XR8 500 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 ZNF677Q86XU0 584 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 RHOT1Q8IXI2 618 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 CYP4X1Q8N118 509 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 DYDC1Q8WWB3 177 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 SLC7A3Q8WY07 619 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 CDHR1Q96JP9 859 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 FAM81BQ96LP2 452 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 AS3MTQ9HBK9 375 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 ADAMTS5Q9UNA0 930 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 SPDYE16A6NNV3 312 aaPredicted RBP13.69□□□□□ -0.22
HIF3A-204ENST00000300862 GH1P01241 217 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 CETPP11597 493 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 LACTB2Q53H82 288 aaPredicted RBP13.69□□□□□ -0.22
HIF3A-204ENST00000300862 CATSPERGQ6ZRH7 1159 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 ZNF365Q70YC5 407 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 GDAP1Q8TB36 358 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 TRIM11Q96F44 468 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 TCHPQ9BT92 498 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 DHX33Q9H6R0 707 aaKnown RBP13.69□□□□□ -0.22
HIF3A-204ENST00000300862 NINJ2Q9NZG7 142 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 MAFBQ9Y5Q3 323 aaPredicted RBP13.69□□□□□ -0.22
HIF3A-204ENST00000300862 STYXL1Q9Y6J8 313 aa13.69□□□□□ -0.22
HIF3A-204ENST00000300862 ARID2Q68CP9 1835 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 A0A0B4J269 797 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 ATF7P17544 494 aaPredicted RBP13.68□□□□□ -0.22
HIF3A-204ENST00000300862 NAMPTP43490 491 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 PSMC4P43686 418 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 PTP4A2Q12974 167 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 XRCC4Q13426 336 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 MPP2Q14168 576 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 IZUMO3Q5VZ72 239 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 MFSD5Q6N075 450 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 CYP4F22Q6NT55 531 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 TAOK1Q7L7X3 1001 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 ARMC9Q7Z3E5 817 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 ANKRD35Q8N283 1001 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.68□□□□□ -0.22
HIF3A-204ENST00000300862 ZNF606Q8WXB4 792 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 HAUS1Q96CS2 278 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 GINM1Q9NU53 330 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 CNTNAP2Q9UHC6 1331 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 RLFQ13129 1914 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 H0YCG3 227 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms