RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 BCO2Q9BYV7 579 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 CHST12Q9NRB3 414 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 CEP350Q5VT06 3117 aa16.79■□□□□ 0.28
HERPUD1-201ENST00000300302 GPR182O15218 404 aa16.79■□□□□ 0.28
HERPUD1-201ENST00000300302 THAP12O43422 761 aa16.79■□□□□ 0.28
HERPUD1-201ENST00000300302 XPOTO43592 962 aaKnown RBP16.79■□□□□ 0.28
HERPUD1-201ENST00000300302 CHRNA1P02708 482 aa16.79■□□□□ 0.28
HERPUD1-201ENST00000300302 ALKAL1Q6UXT8 129 aa16.79■□□□□ 0.28
HERPUD1-201ENST00000300302 SCARA5Q6ZMJ2 495 aa16.79■□□□□ 0.28
HERPUD1-201ENST00000300302 ARRDC4Q8NCT1 418 aa16.79■□□□□ 0.28
HERPUD1-201ENST00000300302 TPCN2Q8NHX9 752 aa16.79■□□□□ 0.28
HERPUD1-201ENST00000300302 WNT8BQ93098 351 aa16.79■□□□□ 0.28
HERPUD1-201ENST00000300302 FAM124BQ9H5Z6 455 aaPredicted RBP16.79■□□□□ 0.28
HERPUD1-201ENST00000300302 CYP3A43Q9HB55 503 aa16.79■□□□□ 0.28
HERPUD1-201ENST00000300302 PARP2Q9UGN5 583 aa16.79■□□□□ 0.28
HERPUD1-201ENST00000300302 ST3GAL5Q9UNP4 418 aa16.79■□□□□ 0.28
HERPUD1-201ENST00000300302 HYOU1Q9Y4L1 999 aa16.79■□□□□ 0.28
HERPUD1-201ENST00000300302 MYH10P35580 1976 aa16.79■□□□□ 0.28
HERPUD1-201ENST00000300302 WEE2P0C1S8 567 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 AKAP5P24588 427 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 TUBB4BP68371 445 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 MGAT3Q09327 533 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 NFX1Q12986 1120 aaKnown RBP16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 TCEAL1Q15170 157 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 LHX8Q68G74 356 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 HACE1Q8IYU2 909 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 TTC39CQ8N584 583 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 TRIM11Q96F44 468 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 PUF60Q9UHX1 559 aaKnown RBP16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 UBQLN1Q9UMX0 589 aaKnown RBP16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 POLIQ9UNA4 740 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 IPPQ9Y573 584 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 UNGP13051 313 aaPredicted RBP16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 HADHBP55084 474 aaKnown RBP16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 TNNC1P63316 161 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 CKAP4Q07065 602 aaKnown RBP16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 ZBTB6Q15916 424 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 MEI1Q5TIA1 1274 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 LRRC57Q8N9N7 239 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 UBXN4Q92575 508 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 TLR10Q9BXR5 811 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 CTTNBP2NLQ9P2B4 639 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 PTPN22Q9Y2R2 807 aa16.78■□□□□ 0.28
HERPUD1-201ENST00000300302 TLR3O15455 904 aaKnown RBP16.77■□□□□ 0.27
HERPUD1-201ENST00000300302 FTCDO95954 541 aa16.77■□□□□ 0.27
HERPUD1-201ENST00000300302 MYCP01106 439 aaPredicted RBP16.77■□□□□ 0.27
HERPUD1-201ENST00000300302 CALCAP01258 141 aa16.77■□□□□ 0.27
HERPUD1-201ENST00000300302 CD4P01730 458 aa16.77■□□□□ 0.27
HERPUD1-201ENST00000300302 CYP1A1P04798 512 aaPredicted RBP16.77■□□□□ 0.27
HERPUD1-201ENST00000300302 NSFP46459 744 aaKnown RBP16.77■□□□□ 0.27
HERPUD1-201ENST00000300302 DAAM2Q86T65 1068 aa16.77■□□□□ 0.27
HERPUD1-201ENST00000300302 ZNF606Q8WXB4 792 aa16.77■□□□□ 0.27
HERPUD1-201ENST00000300302 ARHGEF26Q96DR7 871 aa16.77■□□□□ 0.27
HERPUD1-201ENST00000300302 ZMAT2Q96NC0 199 aaKnown RBP16.77■□□□□ 0.27
HERPUD1-201ENST00000300302 OSBPL9Q96SU4 736 aa16.77■□□□□ 0.27
HERPUD1-201ENST00000300302 OSGEPQ9NPF4 335 aa16.77■□□□□ 0.27
HERPUD1-201ENST00000300302 GTF3C4Q9UKN8 822 aa16.77■□□□□ 0.27
HERPUD1-201ENST00000300302 CTAGE15A4D2H0 777 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 SRGAP2O75044 1071 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 CAND2O75155 1236 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 TADA3O75528 432 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 CTAGE8P0CG41 777 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 MYBL1P10243 752 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 KCNE1P15382 129 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 ZSCAN20P17040 1043 aaPredicted RBP16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 ATF7P17544 494 aaPredicted RBP16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 GUCY2FP51841 1108 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 CENPCQ03188 943 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 ZNF394Q53GI3 561 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 XKR4Q5GH76 650 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 SLFN11Q7Z7L1 901 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 CTAGE6Q86UF2 777 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 CTAGE4Q8IX94 777 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 LRRC52Q8N7C0 313 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 SMG8Q8ND04 991 aaKnown RBP16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 LRRN4CLQ8ND94 238 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 GOLGA1Q92805 767 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 ZNF653Q96CK0 615 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 TRMT13Q9NUP7 481 aaKnown RBP16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 SMIM28A0A1B0GU29 152 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 KBTBD13C9JR72 458 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 MED7O43513 233 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 NCK2O43639 380 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 CYP1A2P05177 515 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 PAEPP09466 180 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 RPS6KA1Q15418 735 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 GLRA4Q5JXX5 417 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 PEX26Q7Z412 305 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 CAGE1Q8TC20 777 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 RPGRIP1Q96KN7 1286 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 STARD7Q9NQZ5 370 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 KLK14Q9P0G3 267 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 UVRAGQ9P2Y5 699 aa16.76■□□□□ 0.27
HERPUD1-201ENST00000300302 A0A1W2PQ45 241 aaPredicted RBP16.75■□□□□ 0.27
HERPUD1-201ENST00000300302 A0A1W2PQY0 241 aa16.75■□□□□ 0.27
HERPUD1-201ENST00000300302 FAM170AA1A519 330 aa16.75■□□□□ 0.27
HERPUD1-201ENST00000300302 LSM8O95777 96 aaKnown RBP16.75■□□□□ 0.27
HERPUD1-201ENST00000300302 RAP1GAPP47736 663 aa16.75■□□□□ 0.27
HERPUD1-201ENST00000300302 PAK2Q13177 524 aa16.75■□□□□ 0.27
HERPUD1-201ENST00000300302 FAM26DQ5JW98 314 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms