RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 OGTO15294 1046 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 CLDN3O15551 220 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 PRMT3O60678 531 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 EFCAB14O75071 495 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 EOMESO95936 686 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 AMHP03971 560 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 NR3C1P04150 777 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 ATP2A2P16615 1042 aaKnown RBP6.42□□□□□ -1.38
SSX3-201ENST00000298396 ZSCAN20P17040 1043 aaPredicted RBP6.42□□□□□ -1.38
SSX3-201ENST00000298396 CCNE1P24864 410 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 MLH1P40692 756 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 KCNJ6P48051 423 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 RAB27AP51159 221 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 CYP2J2P51589 502 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 STX17P56962 302 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 PTSQ03393 145 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 TYRO3Q06418 890 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 SOX4Q06945 474 aaPredicted RBP6.42□□□□□ -1.38
SSX3-201ENST00000298396 NFIL3Q16649 462 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 ZSCAN23Q3MJ62 389 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 PAN2Q504Q3 1202 aaKnown RBP6.42□□□□□ -1.38
SSX3-201ENST00000298396 C1orf220Q5T0J3 134 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 SH3PXD2AQ5TCZ1 1133 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 EFCAB13Q8IY85 973 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 SYCP3Q8IZU3 236 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 RNF169Q8NCN4 708 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 NELFBQ8WX92 580 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 POMGNT1Q8WZA1 660 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 P2RX5Q93086 422 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 EEF2KMTQ96G04 330 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 BORCS6Q96GS4 357 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 CCDC34Q96HJ3 373 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 PPP1R10Q96QC0 940 aaKnown RBP6.42□□□□□ -1.38
SSX3-201ENST00000298396 SLC9A7Q96T83 725 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 GAD1Q99259 594 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 PBX4Q9BYU1 374 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 HSD3B7Q9H2F3 369 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 CWH43Q9H720 699 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 TMEM206Q9H813 350 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 RSAD1Q9HA92 442 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 HOOK1Q9UJC3 728 aaKnown RBP6.42□□□□□ -1.38
SSX3-201ENST00000298396 AGO2Q9UKV8 859 aaKnown RBP6.42□□□□□ -1.38
SSX3-201ENST00000298396 EXOC7Q9UPT5 735 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 MRPL42Q9Y6G3 142 aaKnown RBP6.42□□□□□ -1.38
SSX3-201ENST00000298396 GREB1Q4ZG55 1949 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 DENND4CQ5VZ89 1909 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 C2orf16Q68DN1 1984 aa6.42□□□□□ -1.38
SSX3-201ENST00000298396 SYCE3A1L190 88 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 EPOPA6NHQ4 379 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 TBKBP1A7MCY6 615 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 LACTBL1A8MY62 500 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 EXTL3O43909 919 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 AKAP3O75969 853 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 DDHD2O94830 711 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 NFICP08651 508 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 CLTAP09496 248 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 ITGA4P13612 1032 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 PTMSP20962 102 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 ABCD1P33897 745 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 SCNN1GP51170 649 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 GUCY2FP51841 1108 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 SPAG1Q07617 926 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 CYP24A1Q07973 514 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 DSC1Q08554 894 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 EDRF1Q3B7T1 1238 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 GLRA4Q5JXX5 417 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 TBCELQ5QJ74 424 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 LMBRD2Q68DH5 695 aaPredicted RBP6.41□□□□□ -1.38
SSX3-201ENST00000298396 KLHL10Q6JEL2 608 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 ARMCX5Q6P1M9 558 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 CD300LGQ6UXG3 332 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 FAM43BQ6ZT52 329 aaPredicted RBP6.41□□□□□ -1.38
SSX3-201ENST00000298396 STXBP4Q6ZWJ1 553 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 ZNF280BQ86YH2 543 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 IRF2BP1Q8IU81 584 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 BRSK2Q8IWQ3 736 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 NPAS3Q8IXF0 933 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 GPD1LQ8N335 351 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 CXorf38Q8TB03 319 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 PHOSPHO2Q8TCD6 241 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 BCL7CQ8WUZ0 217 aaPredicted RBP6.41□□□□□ -1.38
SSX3-201ENST00000298396 CCDC47Q96A33 483 aaKnown RBP6.41□□□□□ -1.38
SSX3-201ENST00000298396 C18orf25Q96B23 403 aaPredicted RBP6.41□□□□□ -1.38
SSX3-201ENST00000298396 DHTKD1Q96HY7 919 aaPredicted RBP6.41□□□□□ -1.38
SSX3-201ENST00000298396 MFSD14AQ96MC6 490 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 PAAF1Q9BRP4 392 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 ADPGKQ9BRR6 497 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 FAM213AQ9BRX8 229 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 TMEM117Q9H0C3 514 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 DNAJC25Q9H1X3 360 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 NKX2-4Q9H2Z4 354 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 CRISPLD1Q9H336 500 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 GOLGA2P5Q9HBQ8 144 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 TOPORSQ9NS56 1045 aaPredicted RBP6.41□□□□□ -1.38
SSX3-201ENST00000298396 TBC1D13Q9NVG8 400 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 CNTN3Q9P232 1028 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 DNAJB4Q9UDY4 337 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 PARP2Q9UGN5 583 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 INPP5FQ9Y2H2 1132 aa6.41□□□□□ -1.38
SSX3-201ENST00000298396 GIT1Q9Y2X7 761 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms