RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 DCDC2Q9UHG0 476 aa13□□□□□ -0.33
SLX4-201ENST00000294008 NAGPAQ9UK23 515 aa13□□□□□ -0.33
SLX4-201ENST00000294008 SRP72O76094 671 aaKnown RBP13□□□□□ -0.33
SLX4-201ENST00000294008 ASNSP08243 561 aa13□□□□□ -0.33
SLX4-201ENST00000294008 POU4F1Q01851 419 aa13□□□□□ -0.33
SLX4-201ENST00000294008 ZNF658Q5TYW1 1059 aaPredicted RBP13□□□□□ -0.33
SLX4-201ENST00000294008 DOK6Q6PKX4 331 aa13□□□□□ -0.33
SLX4-201ENST00000294008 OSBPL1AQ9BXW6 950 aa13□□□□□ -0.33
SLX4-201ENST00000294008 FOXP3Q9BZS1 431 aa13□□□□□ -0.33
SLX4-201ENST00000294008 ASAP1Q9ULH1 1129 aa13□□□□□ -0.33
SLX4-201ENST00000294008 DISP3Q9P2K9 1392 aa13□□□□□ -0.33
SLX4-201ENST00000294008 CHGBP05060 677 aa13□□□□□ -0.33
SLX4-201ENST00000294008 CLTBP09497 229 aa13□□□□□ -0.33
SLX4-201ENST00000294008 SETD3Q86TU7 594 aaPredicted RBP13□□□□□ -0.33
SLX4-201ENST00000294008 DTX3LQ8TDB6 740 aa13□□□□□ -0.33
SLX4-201ENST00000294008 TNIP3Q96KP6 325 aa13□□□□□ -0.33
SLX4-201ENST00000294008 TGS1Q96RS0 853 aaKnown RBP13□□□□□ -0.33
SLX4-201ENST00000294008 C2orf40Q9H1Z8 148 aa13□□□□□ -0.33
SLX4-201ENST00000294008 AVENQ9NQS1 362 aaPredicted RBP13□□□□□ -0.33
SLX4-201ENST00000294008 RBAKQ9NYW8 714 aaPredicted RBP13□□□□□ -0.33
SLX4-201ENST00000294008 ABCC12Q96J65 1359 aa13□□□□□ -0.33
SLX4-201ENST00000294008 ADCY6O43306 1168 aa13□□□□□ -0.33
SLX4-201ENST00000294008 PALMO75781 387 aa13□□□□□ -0.33
SLX4-201ENST00000294008 PRELPP51888 382 aa13□□□□□ -0.33
SLX4-201ENST00000294008 DHTKD1Q96HY7 919 aaPredicted RBP13□□□□□ -0.33
SLX4-201ENST00000294008 ZNF512BQ96KM6 892 aaPredicted RBP13□□□□□ -0.33
SLX4-201ENST00000294008 PRPF18Q99633 342 aaKnown RBP13□□□□□ -0.33
SLX4-201ENST00000294008 TMCC3Q9ULS5 477 aa13□□□□□ -0.33
SLX4-201ENST00000294008 PCDHA7Q9UN72 937 aa13□□□□□ -0.33
SLX4-201ENST00000294008 SNAPC4Q5SXM2 1469 aa13□□□□□ -0.33
SLX4-201ENST00000294008 MAP3K19Q56UN5 1328 aa13□□□□□ -0.33
SLX4-201ENST00000294008 M0R3G1 203 aa13□□□□□ -0.33
SLX4-201ENST00000294008 TEX33O43247 280 aa13□□□□□ -0.33
SLX4-201ENST00000294008 CRKP46108 304 aa13□□□□□ -0.33
SLX4-201ENST00000294008 EIF3EP60228 445 aaKnown RBP13□□□□□ -0.33
SLX4-201ENST00000294008 ZNF564Q8TBZ8 553 aaPredicted RBP13□□□□□ -0.33
SLX4-201ENST00000294008 C1orf54Q8WWF1 131 aa13□□□□□ -0.33
SLX4-201ENST00000294008 GLMNQ92990 594 aa13□□□□□ -0.33
SLX4-201ENST00000294008 PUS3Q9BZE2 481 aaKnown RBP13□□□□□ -0.33
SLX4-201ENST00000294008 FBXO40Q9UH90 709 aa13□□□□□ -0.33
SLX4-201ENST00000294008 ADAMTS1Q9UHI8 967 aa13□□□□□ -0.33
SLX4-201ENST00000294008 TSC22D4Q9Y3Q8 395 aa13□□□□□ -0.33
SLX4-201ENST00000294008 GMFGO60234 142 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 ECE2O60344 883 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 TRIM3O75382 744 aaPredicted RBP12.99□□□□□ -0.33
SLX4-201ENST00000294008 TSPAN9O75954 239 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 MYL4P12829 197 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 ZNF618Q5T7W0 954 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 ULK3Q6PHR2 472 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 OR8H2Q8N162 312 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 SYNE4Q8N205 404 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 CNBD2Q96M20 576 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 AGAP1Q9UPQ3 857 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 ABCC1P33527 1531 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 EEF2KO00418 725 aaKnown RBP12.99□□□□□ -0.33
SLX4-201ENST00000294008 RRM2P31350 389 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 NSUN6Q8TEA1 469 aaKnown RBP12.99□□□□□ -0.33
SLX4-201ENST00000294008 GMCL1Q96IK5 515 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 C14orf93Q9H972 538 aaKnown RBP12.99□□□□□ -0.33
SLX4-201ENST00000294008 NCOA1Q15788 1441 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 ZMYM3Q14202 1370 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 TRIM43BA6NCK2 446 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 C16orf96A6NNT2 1141 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 USP17L10C9JJH3 530 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 ANKRD65E5RJM6 399 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 FGRP09769 529 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 CKBP12277 381 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 ARF3P61204 181 aaPredicted RBP12.99□□□□□ -0.33
SLX4-201ENST00000294008 STXBP1P61764 594 aaKnown RBP12.99□□□□□ -0.33
SLX4-201ENST00000294008 ARF1P84077 181 aaKnown RBP12.99□□□□□ -0.33
SLX4-201ENST00000294008 SCRN3Q0VDG4 424 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 STX4Q12846 297 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 STAMBPL1Q96FJ0 436 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 THUMPD3Q9BV44 507 aaKnown RBP12.99□□□□□ -0.33
SLX4-201ENST00000294008 ROGDIQ9GZN7 287 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 IP6K2Q9UHH9 426 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 DBR1Q9UK59 544 aaKnown RBP12.99□□□□□ -0.33
SLX4-201ENST00000294008 SCAF8Q9UPN6 1271 aaKnown RBP12.99□□□□□ -0.33
SLX4-201ENST00000294008 OPLAHO14841 1288 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 AIM2O14862 343 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 SGSM2O43147 1006 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 MARSP56192 900 aaKnown RBP12.99□□□□□ -0.33
SLX4-201ENST00000294008 MKRN4PQ13434 485 aaPredicted RBP12.99□□□□□ -0.33
SLX4-201ENST00000294008 MTM1Q13496 603 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 ZNF544Q6NX49 715 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 PACS1Q6VY07 963 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 APOBEC3FQ8IUX4 373 aaKnown RBP12.99□□□□□ -0.33
SLX4-201ENST00000294008 PIF1Q9H611 641 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 FAM49BQ9NUQ9 324 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 MAFFQ9ULX9 164 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 PNMA6FA0A0J9YX94 578 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 GNG14A0A1W2PPG7 69 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 LAD1O00515 517 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 DEFA1P59665 94 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 DEFA3P59666 94 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 STX3Q13277 289 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 COG2Q14746 738 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 CYP51A1Q16850 503 aa12.99□□□□□ -0.33
SLX4-201ENST00000294008 TDRD10Q5VZ19 366 aaKnown RBP12.99□□□□□ -0.33
SLX4-201ENST00000294008 ZW10O43264 779 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms