RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ICE2Q659A1 982 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 RGS9BPQ6ZS82 235 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 ARHGAP18Q8N392 663 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 SCFD1Q8WVM8 642 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 YY1AP1Q9H869 796 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 KCNH4Q9UQ05 1017 aa13.43□□□□□ -0.26
PTCD1-201ENST00000292478 H0Y3Z8 333 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 DPYSL4O14531 572 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 COILP38432 576 aaPredicted RBP13.42□□□□□ -0.26
PTCD1-201ENST00000292478 GRIK1P39086 918 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 TSSK1BQ9BXA7 367 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 DEPDC5O75140 1603 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 EEF2KO00418 725 aaKnown RBP13.42□□□□□ -0.26
PTCD1-201ENST00000292478 E2F6O75461 281 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 MAGEA4P43358 317 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 ANGEL2Q5VTE6 544 aaKnown RBP13.42□□□□□ -0.26
PTCD1-201ENST00000292478 SPON2Q9BUD6 331 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 KIAA1257Q9ULG3 409 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 ATP9BO43861 1147 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 GARTP22102 1010 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 KLK7P49862 253 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 POLE2P56282 527 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 LRRC43Q8N309 656 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 C3orf20Q8ND61 904 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 CALML6Q8TD86 181 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 AGBL1Q96MI9 1066 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 ASPSCR1Q9BZE9 553 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 KLC4Q9NSK0 619 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 HACL1Q9UJ83 578 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 PCDHB8Q9UN66 801 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 HIC1Q14526 733 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 GPAT2Q6NUI2 795 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 ATPAF2Q8N5M1 289 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 EGFL8Q99944 293 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 ADA2Q9NZK5 511 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 A0A0A6YYK5 440 aaPredicted RBP13.42□□□□□ -0.26
PTCD1-201ENST00000292478 APRTP07741 180 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 PON1P27169 355 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 SSTR3P32745 418 aaPredicted RBP13.42□□□□□ -0.26
PTCD1-201ENST00000292478 TOB1P50616 345 aaPredicted RBP13.42□□□□□ -0.26
PTCD1-201ENST00000292478 STX3Q13277 289 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 BOLA3Q53S33 107 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 EFCAB12Q6NXP0 572 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 WDR93Q6P2C0 686 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 PPIL6Q8IXY8 311 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 DCP1BQ8IZD4 617 aaKnown RBP13.42□□□□□ -0.26
PTCD1-201ENST00000292478 DACT3Q96B18 629 aaPredicted RBP13.42□□□□□ -0.26
PTCD1-201ENST00000292478 ANLNQ9NQW6 1124 aa13.42□□□□□ -0.26
PTCD1-201ENST00000292478 SPRP35270 261 aaPredicted RBP13.41□□□□□ -0.26
PTCD1-201ENST00000292478 CAP2P40123 477 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 SESN2P58004 480 aaPredicted RBP13.41□□□□□ -0.26
PTCD1-201ENST00000292478 CUL2Q13617 745 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 RARS2Q5T160 578 aaKnown RBP13.41□□□□□ -0.26
PTCD1-201ENST00000292478 TTI2Q6NXR4 508 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 ICA1LQ8NDH6 482 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 OLFM3Q96PB7 478 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 TAAR1Q96RJ0 339 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 TSC22D3Q99576 134 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 TEX12Q9BXU0 123 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 CATSPERBQ9H7T0 1116 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 NAGPAQ9UK23 515 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 SNRPAP09012 282 aaKnown RBP13.41□□□□□ -0.26
PTCD1-201ENST00000292478 RPS6P62753 249 aaKnown RBP13.41□□□□□ -0.26
PTCD1-201ENST00000292478 COL23A1Q86Y22 540 aaPredicted RBP13.41□□□□□ -0.26
PTCD1-201ENST00000292478 GPRC5AQ8NFJ5 357 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 CXorf38Q8TB03 319 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 TMC2Q8TDI7 906 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 GANCQ8TET4 914 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 SERPINB12Q96P63 405 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 ZSWIM1Q9BR11 485 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 RTFDC1Q9BY42 306 aaPredicted RBP13.41□□□□□ -0.26
PTCD1-201ENST00000292478 RIOX1Q9H6W3 641 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.41□□□□□ -0.26
PTCD1-201ENST00000292478 MTO1Q9Y2Z2 717 aaKnown RBP13.41□□□□□ -0.26
PTCD1-201ENST00000292478 CETPP11597 493 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 ITGA4P13612 1032 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 TTC39BQ5VTQ0 682 aaPredicted RBP13.41□□□□□ -0.26
PTCD1-201ENST00000292478 NOTUMQ6P988 496 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 SLC13A5Q86YT5 568 aaPredicted RBP13.41□□□□□ -0.26
PTCD1-201ENST00000292478 RMDN1Q96DB5 314 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 KLHL11Q9NVR0 708 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 POLIQ9UNA4 740 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 ZBTB12Q9Y330 459 aaPredicted RBP13.41□□□□□ -0.26
PTCD1-201ENST00000292478 SNX5Q9Y5X3 404 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 UBA6A0AVT1 1052 aaPredicted RBP13.41□□□□□ -0.26
PTCD1-201ENST00000292478 ZNF197O14709 1029 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 MAPTP10636 758 aaKnown RBP13.41□□□□□ -0.26
PTCD1-201ENST00000292478 GZMAP12544 262 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 STIP1P31948 543 aaKnown RBP13.41□□□□□ -0.26
PTCD1-201ENST00000292478 NAMPTP43490 491 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 DGKDQ16760 1214 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 LONRF1Q17RB8 773 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 TRIM65Q6PJ69 517 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 TAS2R42Q7RTR8 314 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 ZNF518BQ9C0D4 1074 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 VPS33BQ9H267 617 aa13.41□□□□□ -0.26
PTCD1-201ENST00000292478 DYNC1LI2O43237 492 aaPredicted RBP13.4□□□□□ -0.26
PTCD1-201ENST00000292478 KLHL2O95198 593 aa13.4□□□□□ -0.26
PTCD1-201ENST00000292478 KRT16P08779 473 aa13.4□□□□□ -0.26
PTCD1-201ENST00000292478 IL10P22301 178 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms