RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 LMO3Q8TAP4 145 aa12.32□□□□□ -0.44
CHRNB3-201ENST00000289957 BAP1Q92560 729 aa12.32□□□□□ -0.44
CHRNB3-201ENST00000289957 LSM14BQ9BX40 385 aaKnown RBP12.32□□□□□ -0.44
CHRNB3-201ENST00000289957 TRIM6Q9C030 488 aaPredicted RBP12.32□□□□□ -0.44
CHRNB3-201ENST00000289957 METTL14Q9HCE5 456 aaKnown RBP12.32□□□□□ -0.44
CHRNB3-201ENST00000289957 SIX2Q9NPC8 291 aa12.32□□□□□ -0.44
CHRNB3-201ENST00000289957 TMEM39AQ9NV64 488 aa12.32□□□□□ -0.44
CHRNB3-201ENST00000289957 GCNT4Q9P109 453 aa12.32□□□□□ -0.44
CHRNB3-201ENST00000289957 RNF14Q9UBS8 474 aa12.32□□□□□ -0.44
CHRNB3-201ENST00000289957 PCDHB2Q9Y5E7 798 aa12.32□□□□□ -0.44
CHRNB3-201ENST00000289957 PCDHA13Q9Y5I0 950 aa12.32□□□□□ -0.44
CHRNB3-201ENST00000289957 DCDC2CA8MYV0 355 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 PDE2AO00408 941 aaPredicted RBP12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 PPEF2O14830 753 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 PON1P27169 355 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 TFAMQ00059 246 aaKnown RBP12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 MYL7Q01449 175 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 DSC3Q14574 896 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 PCMTD1Q96MG8 357 aaPredicted RBP12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 SELENOOQ9BVL4 669 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 FAM204AQ9H8W3 233 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 FAM105AQ9NUU6 356 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 MIOSQ9NXC5 875 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 PARP2Q9UGN5 583 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 FEZ2Q9UHY8 353 aaPredicted RBP12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 ABCD1P33897 745 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 TNNT3P45378 269 aaPredicted RBP12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 GLE1Q53GS7 698 aaKnown RBP12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 ARHGEF19Q8IW93 802 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 FNBP1Q96RU3 617 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 ADPGKQ9BRR6 497 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 RPF1Q9H9Y2 349 aaKnown RBP12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 NLRC4Q9NPP4 1024 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 HCSTQ9UBK5 93 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 TUBGCP4Q9UGJ1 667 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 MROH7Q68CQ1 1323 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 TANC1Q9C0D5 1861 aa12.31□□□□□ -0.44
CHRNB3-201ENST00000289957 GPR182O15218 404 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 CALCAP01258 141 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 C4BPAP04003 597 aaKnown RBP12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 CLTBP09497 229 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 ACRP10323 421 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 MLH1P40692 756 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 GRM5P41594 1212 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 GATMP50440 423 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 MXI1P50539 228 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 SOX4Q06945 474 aaPredicted RBP12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 PHLDB3Q6NSJ2 640 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 EMBQ6PCB8 327 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 AGMOQ6ZNB7 445 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 C15orf39Q6ZRI6 1047 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 RRAGAQ7L523 313 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 ANKLE1Q8NAG6 615 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 GSTCDQ8NEC7 633 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 CAVIN3Q969G5 261 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 ACAP3Q96P50 834 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 CAPN6Q9Y6Q1 641 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 XIRP2A4UGR9 3374 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 SRGAP2O75044 1071 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 CLTAP09496 248 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 FGFR1P11362 822 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 CSF2RAP15509 400 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 SYN1P17600 705 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 SCP2P22307 547 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 EIF4A3P38919 411 aaKnown RBP12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 EPHB4P54760 987 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 CLDN10P78369 228 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 EXOC3L4Q17RC7 722 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 TATDN2Q93075 761 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 CAPZA3Q96KX2 299 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 SNX27Q96L92 541 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 TOX2Q96NM4 488 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 OSBPL9Q96SU4 736 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 SH3GL2Q99962 352 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 APOBEC3GQ9HC16 384 aaKnown RBP12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 CEP72Q9P209 647 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 SIX4Q9UIU6 781 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 TFR2Q9UP52 801 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 RRP15Q9Y3B9 282 aaKnown RBP12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 REV3LO60673 3130 aa12.3□□□□□ -0.44
CHRNB3-201ENST00000289957 SCN1AP35498 2009 aa12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 F8W810 466 aa12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 PITPNM1O00562 1244 aa12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 PTGESO14684 152 aa12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 MAPK13O15264 365 aa12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 B4GALT3O60512 393 aa12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 LDHAP00338 332 aaKnown RBP12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 CDR1P51861 262 aa12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 POLR2FP61218 127 aaKnown RBP12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 C2orf54Q08AI8 447 aa12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 BIRC3Q13489 604 aa12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 BFSP2Q13515 415 aa12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 EPC2Q52LR7 807 aa12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 C1orf53Q5VUE5 145 aa12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 GBP6Q6ZN66 633 aa12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 C1orf127Q8N9H9 656 aa12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 CXorf38Q8TB03 319 aa12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 TMC2Q8TDI7 906 aa12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 GAD1Q99259 594 aa12.29□□□□□ -0.44
CHRNB3-201ENST00000289957 CGRRF1Q99675 332 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms