RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 RHOT2Q8IXI1 618 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 XXYLT1Q8NBI6 393 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 DACT3Q96B18 629 aaPredicted RBP12□□□□□ -0.49
NPC1L1-201ENST00000289547 NAF1Q96HR8 494 aaKnown RBP12□□□□□ -0.49
NPC1L1-201ENST00000289547 SLC38A7Q9NVC3 462 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 WARS2Q9UGM6 360 aaKnown RBP12□□□□□ -0.49
NPC1L1-201ENST00000289547 SLC12A6Q9UHW9 1150 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 DBR1Q9UK59 544 aaKnown RBP12□□□□□ -0.49
NPC1L1-201ENST00000289547 SFI1A8K8P3 1242 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 MCF2LO15068 1137 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 RAD51CO43502 376 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 KDM1AO60341 852 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 ITGA4P13612 1032 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 COPS2P61201 443 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 MRPS9P82933 396 aaKnown RBP11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 KRT17Q04695 432 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 SWT1Q5T5J6 900 aaKnown RBP11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 TRIM65Q6PJ69 517 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 TRMT10CQ7L0Y3 403 aaKnown RBP11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 CD99L2Q8TCZ2 262 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 USP6NLQ92738 828 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 CYP4F11Q9HBI6 524 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 DMGDHQ9UI17 866 aaKnown RBP11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 PKD1L3Q7Z443 1732 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 UPP2O95045 317 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 KCNB1Q14721 858 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 RBM43Q6ZSC3 357 aaKnown RBP11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 AFG1LQ8WV93 481 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 RAPGEF5Q92565 580 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 HAUS8Q9BT25 410 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 IL25Q9H293 177 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 ZC4H2Q9NQZ6 224 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 CREBZFQ9NS37 354 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 NXF1Q9UBU9 619 aaKnown RBP11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 AFG3L2Q9Y4W6 797 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 ITIH6Q6UXX5 1313 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 IQANK1A0A1B0GTG1 560 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 CAND2O75155 1236 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 FLT3LGP49771 235 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 SCYL2Q6P3W7 929 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 NIPA1Q7RTP0 329 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 LRRC34Q8IZ02 419 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 PDIK1LQ8N165 341 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 THAP11Q96EK4 314 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 SENP2Q9HC62 589 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 A1CFQ9NQ94 594 aaKnown RBP11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 ETAA1Q9NY74 926 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 RAB21Q9UL25 225 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 SLC45A1Q9Y2W3 748 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 PQBP1O60828 265 aaKnown RBP11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 CHRNA3P32297 505 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 PSMC1P62191 440 aaKnown RBP11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 C7orf43Q8WVR3 580 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 TRIM51Q9BSJ1 452 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 CHMP2BQ9UQN3 213 aa11.99□□□□□ -0.49
NPC1L1-201ENST00000289547 DPYSL4O14531 572 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 MAN1A2O60476 641 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 CAPN15O75808 1086 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 ATP6V1G2O95670 118 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 KITP10721 976 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 PRKAR2AP13861 404 aaKnown RBP11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 KRT81Q14533 505 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 CYTH1Q15438 398 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 NOTUMQ6P988 496 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 IFNL1Q8IU54 200 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 LRRC4Q9HBW1 653 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 RGL1Q9NZL6 768 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 POLIQ9UNA4 740 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 APOBEC2Q9Y235 224 aaKnown RBP11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 COPEO14579 308 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 DYNLT1P63172 113 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 TRAPPC11Q7Z392 1133 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 UBE2TQ9NPD8 197 aaPredicted RBP11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 SMYD2Q9NRG4 433 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 L3MBTL1Q9Y468 752 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 A0A0G2JLL6 359 aaPredicted RBP11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 VHLP40337 213 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 TREML2Q5T2D2 321 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 TAF2Q6P1X5 1199 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 NECAB2Q7Z6G3 386 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 PRRT2Q7Z6L0 340 aaPredicted RBP11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 MSL3Q8N5Y2 521 aaKnown RBP11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 PDP2Q9P2J9 529 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 TTLL3Q9Y4R7 772 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 H3BRB1 525 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 GARSP41250 739 aaKnown RBP11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 IL1RL1Q01638 556 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 CCDC137Q6PK04 289 aaKnown RBP11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 HAUS6Q7Z4H7 955 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 APLFQ8IW19 511 aaPredicted RBP11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 KIAA2013Q8IYS2 634 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 OR6B3Q8NGW1 331 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 KCNB2Q92953 911 aa11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 POLR3CQ9BUI4 534 aaPredicted RBP11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 TUT1Q9H6E5 874 aaKnown RBP11.98□□□□□ -0.49
NPC1L1-201ENST00000289547 CCDC22O60826 627 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 GSTA1P08263 222 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 GSTA2P09210 222 aa11.97□□□□□ -0.49
NPC1L1-201ENST00000289547 KRT3P12035 628 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms