RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 HHIPL1Q96JK4 782 aa10.86□□□□□ -0.67
C9orf43-201ENST00000288462 RNPC3Q96LT9 517 aaKnown RBP10.86□□□□□ -0.67
C9orf43-201ENST00000288462 KRT12Q99456 494 aa10.86□□□□□ -0.67
C9orf43-201ENST00000288462 ADPGKQ9BRR6 497 aa10.86□□□□□ -0.67
C9orf43-201ENST00000288462 KATNAL1Q9BW62 490 aa10.86□□□□□ -0.67
C9orf43-201ENST00000288462 UBXN6Q9BZV1 441 aa10.86□□□□□ -0.67
C9orf43-201ENST00000288462 FAM49AQ9H0Q0 323 aaPredicted RBP10.86□□□□□ -0.67
C9orf43-201ENST00000288462 WNT8AQ9H1J5 351 aa10.86□□□□□ -0.67
C9orf43-201ENST00000288462 POLIQ9UNA4 740 aa10.86□□□□□ -0.67
C9orf43-201ENST00000288462 SCN10AQ9Y5Y9 1956 aa10.86□□□□□ -0.67
C9orf43-201ENST00000288462 TMEM110-MUSTN1A8MSY1 372 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 CA12O43570 354 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 STAU1O95793 577 aaKnown RBP10.85□□□□□ -0.67
C9orf43-201ENST00000288462 MYL3P08590 195 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 AKR1A1P14550 325 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 DARSP14868 501 aaKnown RBP10.85□□□□□ -0.67
C9orf43-201ENST00000288462 CD58P19256 250 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 RRM1P23921 792 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 HOXA11P31270 313 aaPredicted RBP10.85□□□□□ -0.67
C9orf43-201ENST00000288462 ATICP31939 592 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 MARCKSL1P49006 195 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 PEX5P50542 639 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 RNASE9P60153 205 aaKnown RBP10.85□□□□□ -0.67
C9orf43-201ENST00000288462 C1QBPQ07021 282 aaKnown RBP10.85□□□□□ -0.67
C9orf43-201ENST00000288462 TMEM132DQ14C87 1099 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 CLUL1Q15846 466 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 FSCN1Q16658 493 aaKnown RBP10.85□□□□□ -0.67
C9orf43-201ENST00000288462 ZNF667Q5HYK9 610 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 SCARA5Q6ZMJ2 495 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 UBL4BQ8N7F7 174 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 KRT35Q92764 455 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 ACAP3Q96P50 834 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 GDF3Q9NR23 364 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 PCDHGC3Q9UN70 934 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 BHMG1C9JSJ3 638 aaPredicted RBP10.85□□□□□ -0.67
C9orf43-201ENST00000288462 ITGB3P05106 788 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 WEE2P0C1S8 567 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 FGFR4P22455 802 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 CDH5P33151 784 aaPredicted RBP10.85□□□□□ -0.67
C9orf43-201ENST00000288462 BEX3Q00994 111 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 SLC7A5Q01650 507 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 TMEM62Q0P6H9 643 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 SLC27A1Q6PCB7 646 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 APBB1IPQ7Z5R6 666 aaPredicted RBP10.85□□□□□ -0.67
C9orf43-201ENST00000288462 CPNE8Q86YQ8 564 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 PASD1Q8IV76 773 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 CD302Q8IX05 232 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 TRPV1Q8NER1 839 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 BTBD6Q96KE9 485 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 SLITRK6Q9H5Y7 841 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 ANAPC7Q9UJX3 599 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 ITGA11Q9UKX5 1188 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 DERAQ9Y315 318 aa10.85□□□□□ -0.67
C9orf43-201ENST00000288462 CCDC66A2RUB6 948 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 KRIT1O00522 736 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 RAD51CO43502 376 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 DUSP11O75319 330 aaKnown RBP10.84□□□□□ -0.67
C9orf43-201ENST00000288462 HEXIM1O94992 359 aaKnown RBP10.84□□□□□ -0.67
C9orf43-201ENST00000288462 FGGP02679 453 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 GLI1P08151 1106 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 KRT19P08727 400 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 CYBAP13498 195 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 MMP8P22894 467 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 BRD2P25440 801 aaKnown RBP10.84□□□□□ -0.67
C9orf43-201ENST00000288462 MRPS25P82663 173 aaKnown RBP10.84□□□□□ -0.67
C9orf43-201ENST00000288462 PURAQ00577 322 aaKnown RBP10.84□□□□□ -0.67
C9orf43-201ENST00000288462 CASP8Q14790 479 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 LIN9Q5TKA1 542 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 PLEKHA7Q6IQ23 1121 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 CATSPER4Q7RTX7 472 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 GSPT2Q8IYD1 628 aaKnown RBP10.84□□□□□ -0.67
C9orf43-201ENST00000288462 TMEM130Q8N3G9 435 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 PPP1R13LQ8WUF5 828 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 ZIC5Q96T25 663 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 NAP1L3Q99457 506 aaPredicted RBP10.84□□□□□ -0.67
C9orf43-201ENST00000288462 OSMRQ99650 979 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 C11orf70Q9BRQ4 267 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 AP1M1Q9BXS5 423 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 SDCBP2Q9H190 292 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 FAM124BQ9H5Z6 455 aaPredicted RBP10.84□□□□□ -0.67
C9orf43-201ENST00000288462 PLEKHA5Q9HAU0 1116 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 CDHR5Q9HBB8 845 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 ADAM22Q9P0K1 906 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 PCDHA3Q9Y5H8 950 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 TREHO43280 583 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 SPOPO43791 374 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 NPTXRO95502 500 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 PAEPP09466 180 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 ITGA4P13612 1032 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 POLR2BP30876 1174 aaKnown RBP10.84□□□□□ -0.67
C9orf43-201ENST00000288462 RAP1GAPP47736 663 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 FCGRTP55899 365 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 CBX1P83916 185 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 NOTUMQ6P988 496 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 MMS22LQ6ZRQ5 1243 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 KLHL7Q8IXQ5 586 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 DNAJB3Q8WWF6 145 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 TFAP2BQ92481 460 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 SNX27Q96L92 541 aa10.84□□□□□ -0.67
C9orf43-201ENST00000288462 ZNF518BQ9C0D4 1074 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms