RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 PDCP20941 246 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 CD72P21854 359 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 TXLNAP40222 546 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 TNFSF9P41273 254 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 GRM2Q14416 872 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 MCM6Q14566 821 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 ARSHQ5FYA8 562 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 TANGO2Q6ICL3 276 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 OVOS1Q6IE37 1185 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 RNF19BQ6ZMZ0 732 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 ATRIPQ8WXE1 791 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 RAD54LQ92698 747 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 IRF7Q92985 503 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 TCEAL4Q96EI5 215 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 PGLYRP2Q96PD5 576 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 DDX23Q9BUQ8 820 aaKnown RBP15.25■□□□□ 0.03
TPM1-202ENST00000288398 GPR88Q9GZN0 384 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 CCDC39Q9UFE4 941 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 FBXO4Q9UKT5 387 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 YIPF1Q9Y548 306 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 TIMM13Q9Y5L4 95 aaPredicted RBP15.25■□□□□ 0.03
TPM1-202ENST00000288398 MYH11P35749 1972 aa15.25■□□□□ 0.03
TPM1-202ENST00000288398 RIF1Q5UIP0 2472 aaKnown RBP15.24■□□□□ 0.03
TPM1-202ENST00000288398 OAZ2O95190 189 aa15.24■□□□□ 0.03
TPM1-202ENST00000288398 ID4P47928 161 aa15.24■□□□□ 0.03
TPM1-202ENST00000288398 CSTF1Q05048 431 aaKnown RBP15.24■□□□□ 0.03
TPM1-202ENST00000288398 PPP2R5DQ14738 602 aa15.24■□□□□ 0.03
TPM1-202ENST00000288398 KARSQ15046 597 aaKnown RBP15.24■□□□□ 0.03
TPM1-202ENST00000288398 SF3A1Q15459 793 aaKnown RBP15.24■□□□□ 0.03
TPM1-202ENST00000288398 FAM78AQ5JUQ0 283 aa15.24■□□□□ 0.03
TPM1-202ENST00000288398 PRSS36Q5K4E3 855 aa15.24■□□□□ 0.03
TPM1-202ENST00000288398 SLFN12LQ6IEE8 588 aa15.24■□□□□ 0.03
TPM1-202ENST00000288398 METTL23Q86XA0 190 aa15.24■□□□□ 0.03
TPM1-202ENST00000288398 DEPDC1BQ8WUY9 529 aa15.24■□□□□ 0.03
TPM1-202ENST00000288398 LARP4BQ92615 738 aaKnown RBP15.24■□□□□ 0.03
TPM1-202ENST00000288398 SMARCD2Q92925 531 aa15.24■□□□□ 0.03
TPM1-202ENST00000288398 E2F7Q96AV8 911 aa15.24■□□□□ 0.03
TPM1-202ENST00000288398 BORCS6Q96GS4 357 aa15.24■□□□□ 0.03
TPM1-202ENST00000288398 HEBP1Q9NRV9 189 aa15.24■□□□□ 0.03
TPM1-202ENST00000288398 FAM186AA6NE01 2351 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 ZNF263O14978 683 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 MEFVO15553 781 aaPredicted RBP15.23■□□□□ 0.03
TPM1-202ENST00000288398 FGF19O95750 216 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 PIGRP01833 764 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 GLULP15104 373 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 PSMC3P17980 439 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 TYMPP19971 482 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 GDI1P31150 447 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 MYBPC2Q14324 1141 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 TMEM132DQ14C87 1099 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 VEPH1Q14D04 833 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 ENOX2Q16206 610 aaKnown RBP15.23■□□□□ 0.03
TPM1-202ENST00000288398 TAF12Q16514 161 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 ZNF528Q3MIS6 628 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 ADALQ6DHV7 355 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 JADE1Q6IE81 842 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 ITIH5Q86UX2 942 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 HS6ST3Q8IZP7 471 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 ZSCAN18Q8TBC5 510 aaPredicted RBP15.23■□□□□ 0.03
TPM1-202ENST00000288398 FAM200AQ8TCP9 573 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 CSGALNACT1Q8TDX6 532 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 SECISBP2LQ93073 1101 aaKnown RBP15.23■□□□□ 0.03
TPM1-202ENST00000288398 ASB16Q96NS5 453 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 PLA2G2FQ9BZM2 168 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 HAPLN2Q9GZV7 340 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 CEP72Q9P209 647 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 DSEQ9UL01 958 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 NDRG2Q9UN36 371 aaKnown RBP15.23■□□□□ 0.03
TPM1-202ENST00000288398 DERAQ9Y315 318 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 MTF2Q9Y483 593 aaPredicted RBP15.23■□□□□ 0.03
TPM1-202ENST00000288398 CFAP54Q96N23 3096 aa15.23■□□□□ 0.03
TPM1-202ENST00000288398 DOCK6Q96HP0 2047 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 A0A0B4J269 797 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 DPYSL4O14531 572 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 SPTLC1O15269 473 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 CD2BP2O95400 341 aaKnown RBP15.22■□□□□ 0.03
TPM1-202ENST00000288398 OR4Q2P0C623 313 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 TARSP26639 723 aaKnown RBP15.22■□□□□ 0.03
TPM1-202ENST00000288398 GUCY2FP51841 1108 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 ZNF131P52739 623 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 DUSP4Q13115 394 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 GPR17Q13304 367 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 ZBTB6Q15916 424 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 ARHGAP15Q53QZ3 475 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 SPATA1Q5VX52 437 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 MAP4K3Q8IVH8 894 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 THEM5Q8N1Q8 247 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 RUBCNQ92622 972 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 KCNN1Q92952 543 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 GCNAQ96QF7 691 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 NCDNQ9UBB6 729 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 ASB3Q9Y575 518 aa15.22■□□□□ 0.03
TPM1-202ENST00000288398 MIA3Q5JRA6 1907 aa15.21■□□□□ 0.03
TPM1-202ENST00000288398 GJA1P17302 382 aa15.21■□□□□ 0.03
TPM1-202ENST00000288398 FCARP24071 287 aa15.21■□□□□ 0.03
TPM1-202ENST00000288398 NMT1P30419 496 aaKnown RBP15.21■□□□□ 0.03
TPM1-202ENST00000288398 DDIT3P35638 169 aa15.21■□□□□ 0.03
TPM1-202ENST00000288398 CCR2P41597 374 aa15.21■□□□□ 0.03
TPM1-202ENST00000288398 RPS9P46781 194 aaKnown RBP15.21■□□□□ 0.03
TPM1-202ENST00000288398 AARSP49588 968 aaKnown RBP eCLIP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms