RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 NUP85Q9BW27 656 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 KIAA1586Q9HCI6 787 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 ARHGAP28Q9P2N2 729 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 MUTP22033 750 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 CTGFP29279 349 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 SCNN1GP51170 649 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 ITGA7Q13683 1181 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 EPM2AIP1Q7L775 607 aaPredicted RBP9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 TAS1R3Q7RTX0 852 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 CCDC170Q8IYT3 715 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 C16orf70Q9BSU1 422 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 MKNK1Q9BUB5 465 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 SMYD3Q9H7B4 428 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 MORF4L1Q9UBU8 362 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 NAGPAQ9UK23 515 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 MAGED2Q9UNF1 606 aaPredicted RBP9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 ST3GAL5Q9UNP4 418 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 NRCAMQ92823 1304 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 MEIS3P2A8K0S8 358 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 CAPN9O14815 690 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 HUS1O60921 280 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 NOL4O94818 638 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 LYPLA2O95372 231 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 IVLP07476 585 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 EDNRBP24530 442 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 KIAA1841Q6NSI8 718 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 ERICH1Q86X53 443 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 EMC1Q8N766 993 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 BEST2Q8NFU1 509 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 FIZ1Q96SL8 496 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 KRT12Q99456 494 aa9.62□□□□□ -0.87
CCDC144B-201ENST00000285176 PTPRJQ12913 1337 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 FRMD3A2A2Y4 597 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 HCRTO43612 131 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 ITGA4P13612 1032 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 ARL2P36404 184 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 SF3A3Q12874 501 aaKnown RBP eCLIP9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 BRD3Q15059 726 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 PPP6R3Q5H9R7 873 aaPredicted RBP9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 B4GALNT4Q76KP1 1039 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 SLC35G2Q8TBE7 412 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 AFAP1L1Q8TED9 768 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 LRRC45Q96CN5 670 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 ZBED2Q9BTP6 218 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 CALN1Q9BXU9 219 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 CISHQ9NSE2 258 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 ITIH6Q6UXX5 1313 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 PHLPP2Q6ZVD8 1323 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 PASKQ96RG2 1323 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 ASAP2O43150 1006 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 CLTAP09496 248 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 DNAJB2P25686 324 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 CUL2Q13617 745 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 GDF6Q6KF10 455 aaPredicted RBP9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 COG1Q8WTW3 980 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 PGLYRP2Q96PD5 576 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 DNAJC7Q99615 494 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 TUBGCP4Q9UGJ1 667 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 GARTP22102 1010 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 UAP1Q16222 522 aaPredicted RBP9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 DNAJC24Q6P3W2 148 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 TMEM40Q8WWA1 233 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 BAP1Q92560 729 aa9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 STMN4Q9H169 189 aaPredicted RBP9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 NOC2LQ9Y3T9 749 aaKnown RBP9.61□□□□□ -0.87
CCDC144B-201ENST00000285176 EIF3CLB5ME19 914 aaKnown RBP9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 SEPT4O43236 478 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 CYP11B1P15538 503 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 SLC8A3P57103 927 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 SNX17Q15036 470 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 NOP9Q86U38 636 aaKnown RBP9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 IPO4Q8TEX9 1081 aaKnown RBP9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 HSPH1Q92598 858 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 EIF3CQ99613 913 aaKnown RBP9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 SRRDQ9UH36 339 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 SIPA1L1O43166 1804 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 SCAMP3O14828 347 aaKnown RBP9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 ZNF263O14978 683 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 BSPRYQ5W0U4 402 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 B3GNT9Q6UX72 402 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 TMCO2Q7Z6W1 182 aaPredicted RBP9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 NACA2Q9H009 215 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 BZW2Q9Y6E2 419 aaKnown RBP9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 RASSF10A6NK89 507 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 DDX3XO00571 662 aaKnown RBP eCLIP9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 PPEF2O14830 753 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 MSCO60682 206 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 SCP2P22307 547 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 GUCY2DQ02846 1103 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 KCNT1Q5JUK3 1230 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 FAM102AQ5T9C2 384 aaPredicted RBP9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 ZNF564Q8TBZ8 553 aaPredicted RBP9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 ZNF516Q92618 1163 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 KREMEN1Q96MU8 473 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 NIFKQ9BYG3 293 aaKnown RBP9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 NUDT5Q9UKK9 219 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 UBE4BO95155 1302 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 DOCK5Q9H7D0 1870 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 A0A0B4J269 797 aa9.6□□□□□ -0.87
CCDC144B-201ENST00000285176 LRRD1A4D1F6 860 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms