RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 LGR5O75473 907 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 ATP6V1G2O95670 118 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 PTGIRP43119 386 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 SLC29A2Q14542 456 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 C11orf63Q6NUN7 778 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 AGPAT1Q99943 283 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 PCYOX1Q9UHG3 505 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 CFAP73A6NFT4 308 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 H0YCG3 227 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 ADCY3O60266 1144 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 GRIN3BO60391 1043 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 TNNI1P19237 187 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 IGBP1P78318 339 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 PPP1R7Q15435 360 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 ADAT2Q7Z6V5 191 aaKnown RBP19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 ZBTB33Q86T24 672 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 UBL4BQ8N7F7 174 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 RNF149Q8NC42 400 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 SHCBP1Q8NEM2 672 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 MORC4Q8TE76 937 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 ALG3Q92685 438 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 MSTO1Q9BUK6 570 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 THAP2Q9H0W7 228 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 COQ4Q9Y3A0 265 aa19.5■□□□□ 0.71
PDLIM3-201ENST00000284767 TLDC2A0PJX2 215 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 GTF2A2P52657 109 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 MCCD1P59942 119 aaPredicted RBP19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 ZNF211Q13398 564 aaPredicted RBP19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 RIPK1Q13546 671 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 TTLL4Q14679 1199 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 TCEAL1Q15170 157 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 ZNF792Q3KQV3 632 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 SPOPLQ6IQ16 392 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 TAPT1Q6NXT6 567 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 NOP9Q86U38 636 aaKnown RBP19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 CDR2LQ86X02 465 aaPredicted RBP19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 LRRC34Q8IZ02 419 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 RPUSD2Q8IZ73 545 aaKnown RBP19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 PPP1R16BQ96T49 567 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 STYXL1Q9Y6J8 313 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 RFX1P22670 979 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 TNFSF9P41273 254 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 ADCYAP1R1P41586 468 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 GPC3P51654 580 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 LAMTOR4Q0VGL1 99 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 SLMAPQ14BN4 828 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 TNFAIP8L3Q5GJ75 292 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 HIBCHQ6NVY1 386 aaPredicted RBP19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 ILDR2Q71H61 639 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 RHPN2Q8IUC4 686 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 CCDC63Q8NA47 563 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 PCDHB18PQ96TA0 734 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 NOD2Q9HC29 1040 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 COG5Q9UP83 839 aa19.49■□□□□ 0.71
PDLIM3-201ENST00000284767 PMM2O15305 246 aa19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 CTNNA2P26232 953 aa19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 CLCN3P51790 818 aa19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 EPS8L1Q8TE68 723 aa19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 RBAKQ9NYW8 714 aaPredicted RBP19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 SUFUQ9UMX1 484 aa19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 CEP83Q9Y592 693 aa19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 CSDE1O75534 798 aaKnown RBP19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 IFI35P80217 286 aaPredicted RBP19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 ARHGAP1Q07960 439 aa19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 TDRD10Q5VZ19 366 aaKnown RBP19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 MAMDC4Q6UXC1 1216 aa19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 TAOK1Q7L7X3 1001 aa19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 TRPM8Q7Z2W7 1104 aa19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 FAM71AQ8IYT1 594 aa19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 C18orf8Q96DM3 657 aa19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 FAM167AQ96KS9 214 aa19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 NLRP4Q96MN2 994 aa19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 NT5C1BQ96P26 610 aa19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 FNBP1Q96RU3 617 aa19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 PRMT1Q99873 361 aaKnown RBP19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 ALG6Q9Y672 507 aa19.48■□□□□ 0.71
PDLIM3-201ENST00000284767 A0A0B4J269 797 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 ASB14A6NK59 587 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 CHRNB2P17787 502 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 RPL21P46778 160 aaKnown RBP19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 CCNA1P78396 465 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 PLPPR4Q7Z2D5 763 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 SHC3Q92529 594 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 RUNDC3BQ96NL0 473 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 SEMA4AQ9H3S1 761 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 PLXNA1Q9UIW2 1896 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 MSCO60682 206 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 ZNF286BP0CG31 522 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 E2F5Q15329 346 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 MFSD5Q6N075 450 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 TLDC1Q6P9B6 456 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 C15orf39Q6ZRI6 1047 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 PRELID2Q8N945 189 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 OR5B17Q8NGF7 314 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 NOCTQ9UK39 431 aaKnown RBP19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 PLXNB2O15031 1838 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 EVPLQ92817 2033 aa19.47■□□□□ 0.71
PDLIM3-201ENST00000284767 SIP14410 1827 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms