RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 SEC63Q9UGP8 760 aaKnown RBP3.01□□□□□ -1.93
CHD1-201ENST00000284049 IPO5O00410 1097 aaKnown RBP3□□□□□ -1.93
CHD1-201ENST00000284049 CSH1P0DML2 217 aa3□□□□□ -1.93
CHD1-201ENST00000284049 CSH2P0DML3 217 aa3□□□□□ -1.93
CHD1-201ENST00000284049 STAT5AP42229 794 aa3□□□□□ -1.93
CHD1-201ENST00000284049 HABP2Q14520 560 aaPredicted RBP3□□□□□ -1.93
CHD1-201ENST00000284049 C3orf36Q3SXR2 165 aa3□□□□□ -1.93
CHD1-201ENST00000284049 ATG16L1Q676U5 607 aa3□□□□□ -1.93
CHD1-201ENST00000284049 OTOP2Q7RTS6 562 aa3□□□□□ -1.93
CHD1-201ENST00000284049 MFSD4AQ8N468 514 aa3□□□□□ -1.93
CHD1-201ENST00000284049 GABPB2Q8TAK5 448 aaPredicted RBP3□□□□□ -1.93
CHD1-201ENST00000284049 SCFD2Q8WU76 684 aa3□□□□□ -1.93
CHD1-201ENST00000284049 SECISBP2LQ93073 1101 aaKnown RBP3□□□□□ -1.93
CHD1-201ENST00000284049 TCTN2Q96GX1 697 aa3□□□□□ -1.93
CHD1-201ENST00000284049 ORAI3Q9BRQ5 295 aa3□□□□□ -1.93
CHD1-201ENST00000284049 CEP41Q9BYV8 373 aa3□□□□□ -1.93
CHD1-201ENST00000284049 KCNF1Q9H3M0 494 aa3□□□□□ -1.93
CHD1-201ENST00000284049 GREM2Q9H772 168 aa3□□□□□ -1.93
CHD1-201ENST00000284049 ZMAT4Q9H898 229 aa3□□□□□ -1.93
CHD1-201ENST00000284049 ARMCX3Q9UH62 379 aaPredicted RBP3□□□□□ -1.93
CHD1-201ENST00000284049 HERC5Q9UII4 1024 aaKnown RBP3□□□□□ -1.93
CHD1-201ENST00000284049 ZNF711Q9Y462 761 aa3□□□□□ -1.93
CHD1-201ENST00000284049 HS3ST4Q9Y661 456 aa3□□□□□ -1.93
CHD1-201ENST00000284049 C3P01024 1663 aa3□□□□□ -1.93
CHD1-201ENST00000284049 A0A0B4J269 797 aa3□□□□□ -1.93
CHD1-201ENST00000284049 ISM1B1AKI9 464 aa3□□□□□ -1.93
CHD1-201ENST00000284049 ZBTB42B2RXF5 422 aa3□□□□□ -1.93
CHD1-201ENST00000284049 EYA2O00167 538 aa3□□□□□ -1.93
CHD1-201ENST00000284049 DLL1O00548 723 aa3□□□□□ -1.93
CHD1-201ENST00000284049 DIAPH2O60879 1101 aa3□□□□□ -1.93
CHD1-201ENST00000284049 GUCY1B2O75343 617 aa3□□□□□ -1.93
CHD1-201ENST00000284049 PRAMEF1O95521 474 aa3□□□□□ -1.93
CHD1-201ENST00000284049 FGFR2P21802 821 aa3□□□□□ -1.93
CHD1-201ENST00000284049 PSMA3P25788 255 aa3□□□□□ -1.93
CHD1-201ENST00000284049 EEF1GP26641 437 aaKnown RBP3□□□□□ -1.93
CHD1-201ENST00000284049 MANFP55145 182 aaKnown RBP3□□□□□ -1.93
CHD1-201ENST00000284049 UBXN2AP68543 259 aa3□□□□□ -1.93
CHD1-201ENST00000284049 MC1RQ01726 317 aa3□□□□□ -1.93
CHD1-201ENST00000284049 DCTN2Q13561 401 aaKnown RBP3□□□□□ -1.93
CHD1-201ENST00000284049 CBFBQ13951 182 aa3□□□□□ -1.93
CHD1-201ENST00000284049 MEA1Q16626 185 aa3□□□□□ -1.93
CHD1-201ENST00000284049 ARL6IP4Q66PJ3 421 aaKnown RBP3□□□□□ -1.93
CHD1-201ENST00000284049 MILR1Q7Z6M3 343 aa3□□□□□ -1.93
CHD1-201ENST00000284049 P3H2Q8IVL5 708 aa3□□□□□ -1.93
CHD1-201ENST00000284049 OR8H3Q8N146 312 aa3□□□□□ -1.93
CHD1-201ENST00000284049 ZNF837Q96EG3 531 aaPredicted RBP3□□□□□ -1.93
CHD1-201ENST00000284049 FNBP1Q96RU3 617 aa3□□□□□ -1.93
CHD1-201ENST00000284049 CITED2Q99967 270 aaPredicted RBP3□□□□□ -1.93
CHD1-201ENST00000284049 FERMT1Q9BQL6 677 aa3□□□□□ -1.93
CHD1-201ENST00000284049 THAP9Q9H5L6 903 aa3□□□□□ -1.93
CHD1-201ENST00000284049 SOX17Q9H6I2 414 aaPredicted RBP3□□□□□ -1.93
CHD1-201ENST00000284049 RRAGCQ9HB90 399 aa3□□□□□ -1.93
CHD1-201ENST00000284049 CRIM1Q9NZV1 1036 aa3□□□□□ -1.93
CHD1-201ENST00000284049 MYOTQ9UBF9 498 aa3□□□□□ -1.93
CHD1-201ENST00000284049 SEL1LQ9UBV2 794 aa3□□□□□ -1.93
CHD1-201ENST00000284049 DNMT3LQ9UJW3 386 aa3□□□□□ -1.93
CHD1-201ENST00000284049 CPS1P31327 1500 aa3□□□□□ -1.93
CHD1-201ENST00000284049 LRRC14BA6NHZ5 514 aa3□□□□□ -1.93
CHD1-201ENST00000284049 COQ9O75208 318 aa3□□□□□ -1.93
CHD1-201ENST00000284049 URI1O94763 535 aaPredicted RBP3□□□□□ -1.93
CHD1-201ENST00000284049 VIPP01282 170 aa3□□□□□ -1.93
CHD1-201ENST00000284049 AFPP02771 609 aaKnown RBP3□□□□□ -1.93
CHD1-201ENST00000284049 MMEP08473 750 aa3□□□□□ -1.93
CHD1-201ENST00000284049 WEE2P0C1S8 567 aa3□□□□□ -1.93
CHD1-201ENST00000284049 PSMA4P25789 261 aaKnown RBP3□□□□□ -1.93
CHD1-201ENST00000284049 HADHAP40939 763 aa3□□□□□ -1.93
CHD1-201ENST00000284049 IL10RAQ13651 578 aa3□□□□□ -1.93
CHD1-201ENST00000284049 FAM182BQ5T319 152 aa3□□□□□ -1.93
CHD1-201ENST00000284049 JMJD6Q6NYC1 403 aaPredicted RBP3□□□□□ -1.93
CHD1-201ENST00000284049 CYP2R1Q6VVX0 501 aa3□□□□□ -1.93
CHD1-201ENST00000284049 RIOX2Q8IUF8 465 aa3□□□□□ -1.93
CHD1-201ENST00000284049 TOP6BLQ8N6T0 577 aa3□□□□□ -1.93
CHD1-201ENST00000284049 FBLIM1Q8WUP2 373 aa3□□□□□ -1.93
CHD1-201ENST00000284049 CTNNBL1Q8WYA6 563 aaPredicted RBP3□□□□□ -1.93
CHD1-201ENST00000284049 SMARCE1Q969G3 411 aa3□□□□□ -1.93
CHD1-201ENST00000284049 HIC2Q96JB3 615 aa3□□□□□ -1.93
CHD1-201ENST00000284049 C7orf26Q96N11 449 aa3□□□□□ -1.93
CHD1-201ENST00000284049 VRK1Q99986 396 aaPredicted RBP3□□□□□ -1.93
CHD1-201ENST00000284049 DDX23Q9BUQ8 820 aaKnown RBP3□□□□□ -1.93
CHD1-201ENST00000284049 GULP1Q9UBP9 304 aa3□□□□□ -1.93
CHD1-201ENST00000284049 PCOLCE2Q9UKZ9 415 aa3□□□□□ -1.93
CHD1-201ENST00000284049 POMT1Q9Y6A1 747 aa3□□□□□ -1.93
CHD1-201ENST00000284049 ALKQ9UM73 1620 aa3□□□□□ -1.93
CHD1-201ENST00000284049 SYT5O00445 386 aa3□□□□□ -1.93
CHD1-201ENST00000284049 RASAL1O95294 804 aa3□□□□□ -1.93
CHD1-201ENST00000284049 ADH5P11766 374 aa3□□□□□ -1.93
CHD1-201ENST00000284049 HNF4AP41235 474 aa3□□□□□ -1.93
CHD1-201ENST00000284049 ACTR2P61160 394 aa3□□□□□ -1.93
CHD1-201ENST00000284049 PPARDQ03181 441 aa3□□□□□ -1.93
CHD1-201ENST00000284049 EIF4A2Q14240 407 aaKnown RBP3□□□□□ -1.93
CHD1-201ENST00000284049 AMOTQ4VCS5 1084 aa3□□□□□ -1.93
CHD1-201ENST00000284049 DNAJC21Q5F1R6 531 aaKnown RBP3□□□□□ -1.93
CHD1-201ENST00000284049 PITRM1Q5JRX3 1037 aa3□□□□□ -1.93
CHD1-201ENST00000284049 IKBIPQ70UQ0 350 aa3□□□□□ -1.93
CHD1-201ENST00000284049 ARL6IP6Q8N6S5 226 aa3□□□□□ -1.93
CHD1-201ENST00000284049 AVL9Q8NBF6 648 aa3□□□□□ -1.93
CHD1-201ENST00000284049 NRG4Q8WWG1 115 aa3□□□□□ -1.93
CHD1-201ENST00000284049 RSAD2Q8WXG1 361 aa3□□□□□ -1.93
CHD1-201ENST00000284049 ASB12Q8WXK4 309 aa3□□□□□ -1.93
CHD1-201ENST00000284049 NCAPGQ9BPX3 1015 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms