RNA–Protein interactions for RNA: ENST00000279249.2

CDC42EP2-201, Transcript of CDC42 effector protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP2, Length 2,023 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP2-201ENST00000279249 LIG3P49916 1009 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 EPHB4P54760 987 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 MYL7Q01449 175 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 POU5F1Q01860 360 aaKnown RBP20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 WDR59Q6PJI9 974 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 ZBTB9Q96C00 473 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 FAM212AQ96EL1 285 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 ACAP3Q96P50 834 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 FNBP1Q96RU3 617 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 CXCL16Q9H2A7 254 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 GTPBP10A4D1E9 387 aaKnown RBP20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 LACTBL1A8MY62 500 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 CLTBP09497 229 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 MYBL2P10244 700 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 GNGT1P63211 74 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 EMC10Q5UCC4 262 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 DPY19L2P1Q6NXN4 242 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 C15orf39Q6ZRI6 1047 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 YTHDF3Q7Z739 585 aaKnown RBP20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 USP37Q86T82 979 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 OR5B17Q8NGF7 314 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 CAVIN3Q969G5 261 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 SCLYQ96I15 445 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 IFIH1Q9BYX4 1025 aaKnown RBP20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 RNF39Q9H2S5 420 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 TMEM8AQ9HCN3 771 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 FAM105AQ9NUU6 356 aa20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 ZNHIT6Q9NWK9 470 aaKnown RBP20.68■□□□□ 0.9
CDC42EP2-201ENST00000279249 FSBPO95073 299 aa20.67■□□□□ 0.9
CDC42EP2-201ENST00000279249 GTF2H1P32780 548 aa20.67■□□□□ 0.9
CDC42EP2-201ENST00000279249 CYP2C18P33260 490 aa20.67■□□□□ 0.9
CDC42EP2-201ENST00000279249 MXI1P50539 228 aa20.67■□□□□ 0.9
CDC42EP2-201ENST00000279249 CCL23P55773 120 aa20.67■□□□□ 0.9
CDC42EP2-201ENST00000279249 LINC01599Q8WXQ3 324 aa20.67■□□□□ 0.9
CDC42EP2-201ENST00000279249 RNF216Q9NWF9 866 aaPredicted RBP20.67■□□□□ 0.9
CDC42EP2-201ENST00000279249 SRRM3A6NNA2 597 aaPredicted RBP20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 EPHB6O15197 1021 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 LRRN2O75325 713 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 RECQL4O94761 1208 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 C4BPAP04003 597 aaKnown RBP20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 TNNI1P19237 187 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 SLC9A1P19634 815 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 AKAP5P24588 427 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 EPC2Q52LR7 807 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 MICALCLQ6ZW33 695 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 SV2AQ7L0J3 742 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 WDR49Q8IV35 697 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 TRIM58Q8NG06 486 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 SNX27Q96L92 541 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 APOL6Q9BWW8 343 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 TMEM39AQ9NV64 488 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 GCNT4Q9P109 453 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 GGA2Q9UJY4 613 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 PCDHB2Q9Y5E7 798 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 MICAL3Q7RTP6 2002 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 PMM2O15305 246 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 SRGAP2O75044 1071 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 IL18RAPO95256 599 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 NFICP08651 508 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 PON1P27169 355 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 SURF1Q15526 300 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 EXOC3L4Q17RC7 722 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 TCTN1Q2MV58 587 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 PLEKHG4Q58EX7 1191 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 TDRD10Q5VZ19 366 aaKnown RBP20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 KRT39Q6A163 491 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 RTN4RL1Q86UN2 441 aaPredicted RBP20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 LMO3Q8TAP4 145 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 CAPZA3Q96KX2 299 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 ADAM2Q99965 735 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 TRAIPQ9BWF2 469 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 LSM14BQ9BX40 385 aaKnown RBP20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 TTYH3Q9C0H2 523 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 SNX12Q9UMY4 172 aa20.66■□□□□ 0.9
CDC42EP2-201ENST00000279249 P4HA2O15460 535 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 ZACNQ401N2 412 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 FIGNQ5HY92 759 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 SCARA3Q6AZY7 606 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 JADE1Q6IE81 842 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 SND1Q7KZF4 910 aaKnown RBP eCLIP20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 C1orf131Q8NDD1 294 aaKnown RBP20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 ASB7Q9H672 318 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 SIX2Q9NPC8 291 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 COQ4Q9Y3A0 265 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 MEIS3P2A8K0S8 358 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 PDE2AO00408 941 aaPredicted RBP20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 NOL4O94818 638 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 ACTN1P12814 892 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 MNAT1P51948 309 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 VAV2P52735 878 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 ZBED6P86452 979 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 ALKAL1Q6UXT8 129 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 TMEM130Q8N3G9 435 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 SEMA4DQ92854 862 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 SECISBP2LQ93073 1101 aaKnown RBP20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 CABS1Q96KC9 395 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 PCMTD1Q96MG8 357 aaPredicted RBP20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 MTMR12Q9C0I1 747 aa20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 FAM207AQ9NSI2 230 aaPredicted RBP20.65■□□□□ 0.9
CDC42EP2-201ENST00000279249 A0A1W2PQJ5 194 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms