RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 PPFIA4O75335 1185 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 MMP3P08254 477 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 TNFAIP2Q03169 654 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 GRB14Q14449 540 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 CCDC50Q8IVM0 306 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 ZDHHC14Q8IZN3 488 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 CCDC26Q8TAB7 109 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 APOL6Q9BWW8 343 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 HEMGNQ9BXL5 484 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 FAM204AQ9H8W3 233 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 PTPRHQ9HD43 1115 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 UVRAGQ9P2Y5 699 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 HES2Q9Y543 173 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 CCDC188H7C350 402 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 KRT14P02533 472 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 FLT3P36888 993 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 MCCD1P59942 119 aaPredicted RBP19.12■□□□□ 0.65
CAPN1-201ENST00000279247 NOMO3P69849 1222 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 CYP4A22Q5TCH4 519 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 CYP4F22Q6NT55 531 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 RGMBQ6NW40 437 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 EMBQ6PCB8 327 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 CALR3Q96L12 384 aaKnown RBP19.12■□□□□ 0.65
CAPN1-201ENST00000279247 ABHD16BQ9H3Z7 469 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 PRMT7Q9NVM4 692 aaPredicted RBP19.12■□□□□ 0.65
CAPN1-201ENST00000279247 MORF4L1Q9UBU8 362 aa19.12■□□□□ 0.65
CAPN1-201ENST00000279247 FAM110CQ1W6H9 321 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 SGSM1Q2NKQ1 1148 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 KCTD16Q68DU8 428 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 MAATS1Q7Z4T9 603 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 CXCL16Q9H2A7 254 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 MGAMO43451 1857 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 MIF4GDA9UHW6 222 aaKnown RBP19.11■□□□□ 0.65
CAPN1-201ENST00000279247 MYCNP04198 464 aaPredicted RBP19.11■□□□□ 0.65
CAPN1-201ENST00000279247 PEX5P50542 639 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 RPL7AP62424 266 aaKnown RBP19.11■□□□□ 0.65
CAPN1-201ENST00000279247 BEX3Q00994 111 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 DR1Q01658 176 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 DUSP28Q4G0W2 176 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 C1orf54Q8WWF1 131 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 TFAP2BQ92481 460 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 PDZD7Q9H5P4 517 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 TNFSF13BQ9Y275 285 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 HSF2BPO75031 334 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 PROZP22891 400 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 LACTBP83111 547 aaPredicted RBP19.11■□□□□ 0.65
CAPN1-201ENST00000279247 DGKDQ16760 1214 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 C1orf127Q8N9H9 656 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 FAM81BQ96LP2 452 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 CDHR5Q9HBB8 845 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 FLRT1Q9NZU1 646 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 SNX24Q9Y343 169 aa19.11■□□□□ 0.65
CAPN1-201ENST00000279247 UTP11Q9Y3A2 253 aaKnown RBP19.11■□□□□ 0.65
CAPN1-201ENST00000279247 GOLGA8SH3BPF8 625 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 ASAP2O43150 1006 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 CYP1A1P04798 512 aaPredicted RBP19.1■□□□□ 0.65
CAPN1-201ENST00000279247 ACSF2Q96CM8 615 aaPredicted RBP19.1■□□□□ 0.65
CAPN1-201ENST00000279247 OSMRQ99650 979 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 WNT8AQ9H1J5 351 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 PIK3R2O00459 728 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 MAGEB2O15479 319 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 ZEB2O60315 1214 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 RWDD2BP57060 319 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 CENPCQ03188 943 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 CFAP58Q5T655 872 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 LIN9Q5TKA1 542 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 MON1BQ7L1V2 547 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 OR2W6PQ8NHA6 318 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 FAM71BQ8TC56 605 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 ATG4AQ8WYN0 398 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 ZIM3Q96PE6 472 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 RPS6KC1Q96S38 1066 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 SMYD3Q9H7B4 428 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 HMGXB4Q9UGU5 601 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 PPME1Q9Y570 386 aa19.1■□□□□ 0.65
CAPN1-201ENST00000279247 TLR3O15455 904 aaKnown RBP19.09■□□□□ 0.65
CAPN1-201ENST00000279247 MEFVO15553 781 aaPredicted RBP19.09■□□□□ 0.65
CAPN1-201ENST00000279247 HADHBP55084 474 aaKnown RBP19.09■□□□□ 0.65
CAPN1-201ENST00000279247 ZNF667Q5HYK9 610 aa19.09■□□□□ 0.65
CAPN1-201ENST00000279247 GLRA4Q5JXX5 417 aa19.09■□□□□ 0.65
CAPN1-201ENST00000279247 MARCH8Q5T0T0 291 aa19.09■□□□□ 0.65
CAPN1-201ENST00000279247 CCDC105Q8IYK2 499 aa19.09■□□□□ 0.65
CAPN1-201ENST00000279247 PRELID2Q8N945 189 aa19.09■□□□□ 0.65
CAPN1-201ENST00000279247 NAP1L3Q99457 506 aaPredicted RBP19.09■□□□□ 0.65
CAPN1-201ENST00000279247 VIPAS39Q9H9C1 493 aa19.09■□□□□ 0.65
CAPN1-201ENST00000279247 TJP2Q9UDY2 1190 aa19.09■□□□□ 0.65
CAPN1-201ENST00000279247 SIX4Q9UIU6 781 aa19.09■□□□□ 0.65
CAPN1-201ENST00000279247 IBSPP21815 317 aaPredicted RBP19.09■□□□□ 0.65
CAPN1-201ENST00000279247 POLR2BP30876 1174 aaKnown RBP19.09■□□□□ 0.65
CAPN1-201ENST00000279247 ZNF200P98182 395 aaPredicted RBP19.09■□□□□ 0.65
CAPN1-201ENST00000279247 DMTNQ08495 405 aa19.09■□□□□ 0.65
CAPN1-201ENST00000279247 XYLT2Q9H1B5 865 aa19.09■□□□□ 0.65
CAPN1-201ENST00000279247 SIP14410 1827 aa19.09■□□□□ 0.65
CAPN1-201ENST00000279247 HTRA3P83110 453 aa19.09■□□□□ 0.65
CAPN1-201ENST00000279247 AMHR2Q16671 573 aa19.09■□□□□ 0.65
CAPN1-201ENST00000279247 ATP13A4Q4VNC1 1196 aa19.09■□□□□ 0.65
CAPN1-201ENST00000279247 ZNF677Q86XU0 584 aa19.09■□□□□ 0.65
CAPN1-201ENST00000279247 UBLCP1Q8WVY7 318 aaPredicted RBP19.09■□□□□ 0.65
CAPN1-201ENST00000279247 AGAP1Q9UPQ3 857 aa19.09■□□□□ 0.65
CAPN1-201ENST00000279247 PI4K2BG5E9Z4 385 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms