RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 MSTO1Q9BUK6 570 aa13.88□□□□□ -0.19
CD44-203ENST00000278386 DDX23Q9BUQ8 820 aaKnown RBP13.88□□□□□ -0.19
CD44-203ENST00000278386 SLITRK6Q9H5Y7 841 aa13.88□□□□□ -0.19
CD44-203ENST00000278386 BRD9Q9H8M2 597 aa13.88□□□□□ -0.19
CD44-203ENST00000278386 ZFP14Q9HCL3 533 aa13.88□□□□□ -0.19
CD44-203ENST00000278386 HEBP1Q9NRV9 189 aa13.88□□□□□ -0.19
CD44-203ENST00000278386 TBX20Q9UMR3 447 aa13.88□□□□□ -0.19
CD44-203ENST00000278386 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.88□□□□□ -0.19
CD44-203ENST00000278386 ZNF638Q14966 1978 aaKnown RBP13.87□□□□□ -0.19
CD44-203ENST00000278386 KIF26AQ9ULI4 1882 aaPredicted RBP13.87□□□□□ -0.19
CD44-203ENST00000278386 VPS37CA5D8V6 355 aaPredicted RBP13.87□□□□□ -0.19
CD44-203ENST00000278386 LACTBL1A8MY62 500 aa13.87□□□□□ -0.19
CD44-203ENST00000278386 M0QZQ0 153 aa13.87□□□□□ -0.19
CD44-203ENST00000278386 OGTO15294 1046 aa13.87□□□□□ -0.19
CD44-203ENST00000278386 OR4Q2P0C623 313 aa13.87□□□□□ -0.19
CD44-203ENST00000278386 CYP3A5P20815 502 aa13.87□□□□□ -0.19
CD44-203ENST00000278386 FCARP24071 287 aa13.87□□□□□ -0.19
CD44-203ENST00000278386 TARSP26639 723 aaKnown RBP13.87□□□□□ -0.19
CD44-203ENST00000278386 MAGEA9P43362 315 aa13.87□□□□□ -0.19
CD44-203ENST00000278386 PLD1Q13393 1074 aa13.87□□□□□ -0.19
CD44-203ENST00000278386 ENOX2Q16206 610 aaKnown RBP13.87□□□□□ -0.19
CD44-203ENST00000278386 FAM78AQ5JUQ0 283 aa13.87□□□□□ -0.19
CD44-203ENST00000278386 BRAPQ7Z569 592 aa13.87□□□□□ -0.19
CD44-203ENST00000278386 BEST2Q8NFU1 509 aa13.87□□□□□ -0.19
CD44-203ENST00000278386 LRRC15Q8TF66 581 aa13.87□□□□□ -0.19
CD44-203ENST00000278386 LARP4BQ92615 738 aaKnown RBP13.87□□□□□ -0.19
CD44-203ENST00000278386 RAD54LQ92698 747 aa13.87□□□□□ -0.19
CD44-203ENST00000278386 DNASE1L2Q92874 299 aa13.87□□□□□ -0.19
CD44-203ENST00000278386 BLOC1S4Q9NUP1 217 aa13.87□□□□□ -0.19
CD44-203ENST00000278386 MTF2Q9Y483 593 aaPredicted RBP13.87□□□□□ -0.19
CD44-203ENST00000278386 SPTBN4Q9H254 2564 aa13.87□□□□□ -0.19
CD44-203ENST00000278386 NCAM2O15394 837 aa13.86□□□□□ -0.19
CD44-203ENST00000278386 TRAK2O60296 914 aa13.86□□□□□ -0.19
CD44-203ENST00000278386 KINO60870 393 aaKnown RBP13.86□□□□□ -0.19
CD44-203ENST00000278386 ODC1P11926 461 aa13.86□□□□□ -0.19
CD44-203ENST00000278386 GJA1P17302 382 aa13.86□□□□□ -0.19
CD44-203ENST00000278386 SCP2P22307 547 aa13.86□□□□□ -0.19
CD44-203ENST00000278386 LONP1P36776 959 aaKnown RBP13.86□□□□□ -0.19
CD44-203ENST00000278386 ID4P47928 161 aa13.86□□□□□ -0.19
CD44-203ENST00000278386 GRIN1Q05586 938 aa13.86□□□□□ -0.19
CD44-203ENST00000278386 JADE1Q6IE81 842 aa13.86□□□□□ -0.19
CD44-203ENST00000278386 POTEHQ6S545 545 aa13.86□□□□□ -0.19
CD44-203ENST00000278386 ZNF852Q6ZMS4 543 aa13.86□□□□□ -0.19
CD44-203ENST00000278386 LEMD2Q8NC56 503 aa13.86□□□□□ -0.19
CD44-203ENST00000278386 ASB16Q96NS5 453 aa13.86□□□□□ -0.19
CD44-203ENST00000278386 OXCT2Q9BYC2 517 aaPredicted RBP13.86□□□□□ -0.19
CD44-203ENST00000278386 OSBPL6Q9BZF3 934 aa13.86□□□□□ -0.19
CD44-203ENST00000278386 CEP72Q9P209 647 aa13.86□□□□□ -0.19
CD44-203ENST00000278386 MAFFQ9ULX9 164 aa13.86□□□□□ -0.19
CD44-203ENST00000278386 NDRG2Q9UN36 371 aaKnown RBP13.86□□□□□ -0.19
CD44-203ENST00000278386 MRPS17Q9Y2R5 130 aaKnown RBP13.86□□□□□ -0.19
CD44-203ENST00000278386 GVINP1Q7Z2Y8 2422 aa13.86□□□□□ -0.19
CD44-203ENST00000278386 OR6C75A6NL08 312 aa13.85□□□□□ -0.19
CD44-203ENST00000278386 NRG2O14511 850 aaPredicted RBP13.85□□□□□ -0.19
CD44-203ENST00000278386 PPEF2O14830 753 aa13.85□□□□□ -0.19
CD44-203ENST00000278386 MICAL2O94851 1124 aa13.85□□□□□ -0.19
CD44-203ENST00000278386 PIGRP01833 764 aa13.85□□□□□ -0.19
CD44-203ENST00000278386 NFICP08651 508 aa13.85□□□□□ -0.19
CD44-203ENST00000278386 NMT1P30419 496 aaKnown RBP13.85□□□□□ -0.19
CD44-203ENST00000278386 GDI1P31150 447 aa13.85□□□□□ -0.19
CD44-203ENST00000278386 ABCD1P33897 745 aa13.85□□□□□ -0.19
CD44-203ENST00000278386 AARSP49588 968 aaKnown RBP eCLIP13.85□□□□□ -0.19
CD44-203ENST00000278386 ZNF131P52739 623 aa13.85□□□□□ -0.19
CD44-203ENST00000278386 CSTF1Q05048 431 aaKnown RBP13.85□□□□□ -0.19
CD44-203ENST00000278386 TMEM132DQ14C87 1099 aa13.85□□□□□ -0.19
CD44-203ENST00000278386 SF3A1Q15459 793 aaKnown RBP13.85□□□□□ -0.19
CD44-203ENST00000278386 TEAD2Q15562 447 aa13.85□□□□□ -0.19
CD44-203ENST00000278386 OVOS1Q6IE37 1185 aa13.85□□□□□ -0.19
CD44-203ENST00000278386 VITQ6UXI7 678 aa13.85□□□□□ -0.19
CD44-203ENST00000278386 MAP4K3Q8IVH8 894 aa13.85□□□□□ -0.19
CD44-203ENST00000278386 ZSCAN18Q8TBC5 510 aaPredicted RBP13.85□□□□□ -0.19
CD44-203ENST00000278386 SMARCD2Q92925 531 aa13.85□□□□□ -0.19
CD44-203ENST00000278386 TRMT61BQ9BVS5 477 aaKnown RBP13.85□□□□□ -0.19
CD44-203ENST00000278386 FBXO4Q9UKT5 387 aa13.85□□□□□ -0.19
CD44-203ENST00000278386 DENND4CQ5VZ89 1909 aa13.85□□□□□ -0.19
CD44-203ENST00000278386 OBSL1O75147 1896 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 FAM189A1O60320 539 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 OAZ2O95190 189 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 PSMC3P17980 439 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 VIPR2P41587 438 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 ALDH1A3P47895 512 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 EPHB3P54753 998 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 DUSP4Q13115 394 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 ZBTB6Q15916 424 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 SPATA1Q5VX52 437 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 ARMCX5Q6P1M9 558 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 SLC39A4Q6P5W5 647 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 CD302Q8IX05 232 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 YAF2Q8IY57 180 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 KIAA2013Q8IYS2 634 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 MAML2Q8IZL2 1156 aaPredicted RBP13.84□□□□□ -0.19
CD44-203ENST00000278386 KRI1Q8N9T8 703 aaKnown RBP13.84□□□□□ -0.19
CD44-203ENST00000278386 SHKBP1Q8TBC3 707 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 DEPDC1BQ8WUY9 529 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 KCNN1Q92952 543 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 IRF7Q92985 503 aa13.84□□□□□ -0.19
CD44-203ENST00000278386 CPSF3Q9UKF6 684 aaKnown RBP13.84□□□□□ -0.19
CD44-203ENST00000278386 A0A0B4J269 797 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 A0A1W2PRU2 124 aa13.83□□□□□ -0.2
CD44-203ENST00000278386 MTMR11A4FU01 709 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms