RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 N4BP3O15049 544 aa13.48□□□□□ -0.25
MRPS28-201ENST00000276585 HYAL3O43820 417 aaPredicted RBP13.48□□□□□ -0.25
MRPS28-201ENST00000276585 HNRNPA1P09651 372 aaKnown RBP eCLIP13.48□□□□□ -0.25
MRPS28-201ENST00000276585 EFNA5P52803 228 aa13.48□□□□□ -0.25
MRPS28-201ENST00000276585 NCBP1Q09161 790 aaKnown RBP13.48□□□□□ -0.25
MRPS28-201ENST00000276585 GAS6Q14393 721 aa13.48□□□□□ -0.25
MRPS28-201ENST00000276585 GRM2Q14416 872 aa13.48□□□□□ -0.25
MRPS28-201ENST00000276585 NAB2Q15742 525 aa13.48□□□□□ -0.25
MRPS28-201ENST00000276585 ARSHQ5FYA8 562 aa13.48□□□□□ -0.25
MRPS28-201ENST00000276585 LILRA6Q6PI73 481 aa13.48□□□□□ -0.25
MRPS28-201ENST00000276585 CACNA2D4Q7Z3S7 1137 aa13.48□□□□□ -0.25
MRPS28-201ENST00000276585 SYT2Q8N9I0 419 aaPredicted RBP13.48□□□□□ -0.25
MRPS28-201ENST00000276585 MCRS1Q96EZ8 462 aa13.48□□□□□ -0.25
MRPS28-201ENST00000276585 IFT74Q96LB3 600 aa13.48□□□□□ -0.25
MRPS28-201ENST00000276585 TRIM6Q9C030 488 aaPredicted RBP13.48□□□□□ -0.25
MRPS28-201ENST00000276585 VPS45Q9NRW7 570 aa13.48□□□□□ -0.25
MRPS28-201ENST00000276585 BLOC1S4Q9NUP1 217 aa13.48□□□□□ -0.25
MRPS28-201ENST00000276585 KLK14Q9P0G3 267 aa13.48□□□□□ -0.25
MRPS28-201ENST00000276585 GTF3C3Q9Y5Q9 886 aa13.48□□□□□ -0.25
MRPS28-201ENST00000276585 CLIC4Q9Y696 253 aa13.48□□□□□ -0.25
MRPS28-201ENST00000276585 NPHP3-ACAD11A0A0J9YXS1 232 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 RECQL4O94761 1208 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 C8AP07357 584 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 PLA2G4BP0C869 781 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 CEACAM1P13688 526 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 LIG1P18858 919 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 PDCP20941 246 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 PEX3P56589 373 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 GRIK3Q13003 919 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 ZRSR1Q15695 479 aaKnown RBP13.47□□□□□ -0.25
MRPS28-201ENST00000276585 PLA2G2CQ5R387 149 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 USP49Q70CQ1 688 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 KBTBD6Q86V97 674 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 WDR5BQ86VZ2 330 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 CEP120Q8N960 986 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 SNX21Q969T3 373 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 AK8Q96MA6 479 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 BBC3Q96PG8 261 aaPredicted RBP13.47□□□□□ -0.25
MRPS28-201ENST00000276585 PAAF1Q9BRP4 392 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 PTPRHQ9HD43 1115 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 SNTG2Q9NY99 539 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 FNIP2Q9P278 1114 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 FBXO2Q9UK22 296 aaPredicted RBP13.47□□□□□ -0.25
MRPS28-201ENST00000276585 PCDHGA5Q9Y5G8 931 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 PIAS3Q9Y6X2 628 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 UNC79Q9P2D8 2635 aa13.47□□□□□ -0.25
MRPS28-201ENST00000276585 LAMA1P25391 3075 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 SFI1A8K8P3 1242 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 MEFVO15553 781 aaPredicted RBP13.46□□□□□ -0.25
MRPS28-201ENST00000276585 SLC26A4O43511 780 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 RPP40O75818 363 aaKnown RBP13.46□□□□□ -0.25
MRPS28-201ENST00000276585 PAPSS2O95340 614 aaPredicted RBP13.46□□□□□ -0.25
MRPS28-201ENST00000276585 BMP15O95972 392 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 CCDC192P0DO97 292 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 CHRNB1P11230 501 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 PLCG1P19174 1290 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 PROZP22891 400 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 RAP1GAPP47736 663 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 CREMQ03060 361 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 RAD51AP2Q09MP3 1159 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 LRRC32Q14392 662 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 KARSQ15046 597 aaKnown RBP13.46□□□□□ -0.25
MRPS28-201ENST00000276585 PABPC1LQ4VXU2 614 aaKnown RBP13.46□□□□□ -0.25
MRPS28-201ENST00000276585 ATF7IP2Q5U623 682 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 TANGO2Q6ICL3 276 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 PROSER1Q86XN7 944 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 KCTD17Q8N5Z5 321 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 DRC1Q96MC2 740 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 ACO2Q99798 780 aaKnown RBP13.46□□□□□ -0.25
MRPS28-201ENST00000276585 MKNK1Q9BUB5 465 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 TIPINQ9BVW5 301 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 CDT1Q9H211 546 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 TMEM134Q9H6X4 195 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 CHST7Q9NS84 486 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 PARP2Q9UGN5 583 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 FBXW11Q9UKB1 542 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 KLK13Q9UKR3 277 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 KCNH3Q9ULD8 1083 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 TNFSF13BQ9Y275 285 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 MSRB2Q9Y3D2 182 aa13.46□□□□□ -0.25
MRPS28-201ENST00000276585 MRPS23Q9Y3D9 190 aaKnown RBP13.46□□□□□ -0.25
MRPS28-201ENST00000276585 CCDC169A6NNP5 214 aa13.45□□□□□ -0.26
MRPS28-201ENST00000276585 SLC16A4O15374 487 aa13.45□□□□□ -0.26
MRPS28-201ENST00000276585 NR1I2O75469 434 aa13.45□□□□□ -0.26
MRPS28-201ENST00000276585 LONP1P36776 959 aaKnown RBP13.45□□□□□ -0.26
MRPS28-201ENST00000276585 DMP1Q13316 513 aaPredicted RBP13.45□□□□□ -0.26
MRPS28-201ENST00000276585 USP41Q3LFD5 358 aa13.45□□□□□ -0.26
MRPS28-201ENST00000276585 DCAF4L1Q3SXM0 396 aa13.45□□□□□ -0.26
MRPS28-201ENST00000276585 HACE1Q8IYU2 909 aa13.45□□□□□ -0.26
MRPS28-201ENST00000276585 TMEM161BQ8NDZ6 487 aa13.45□□□□□ -0.26
MRPS28-201ENST00000276585 GLIS3Q8NEA6 775 aa13.45□□□□□ -0.26
MRPS28-201ENST00000276585 SPIRE2Q8WWL2 714 aa13.45□□□□□ -0.26
MRPS28-201ENST00000276585 GAB3Q8WWW8 586 aa13.45□□□□□ -0.26
MRPS28-201ENST00000276585 RABGGTAQ92696 567 aa13.45□□□□□ -0.26
MRPS28-201ENST00000276585 IRF7Q92985 503 aa13.45□□□□□ -0.26
MRPS28-201ENST00000276585 ELSPBP1Q96BH3 223 aa13.45□□□□□ -0.26
MRPS28-201ENST00000276585 USP28Q96RU2 1077 aa13.45□□□□□ -0.26
MRPS28-201ENST00000276585 NTPCRQ9BSD7 190 aaKnown RBP13.45□□□□□ -0.26
MRPS28-201ENST00000276585 TRMT61BQ9BVS5 477 aaKnown RBP13.45□□□□□ -0.26
MRPS28-201ENST00000276585 TARS2Q9BW92 718 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms