RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 FAM210AQ96ND0 272 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 GPR101Q96P66 508 aaPredicted RBP12.64□□□□□ -0.39
SRRM4-201ENST00000267260 APOL4Q9BPW4 351 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 XPO7Q9UIA9 1087 aaKnown RBP12.64□□□□□ -0.39
SRRM4-201ENST00000267260 PNMA8CA0A1B0GUJ8 204 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 M0QYV0 167 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 FOSL2P15408 326 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 RGS2P41220 211 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 KCNK10P57789 538 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 TSC22D1Q15714 1073 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 CCDC144BQ3MJ40 725 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 ANKRD40Q6AI12 368 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 RASGRP4Q8TDF6 673 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 FAM20AQ96MK3 541 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 MYLK2Q9H1R3 596 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 ARHGEF38Q9NXL2 777 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 PKP3Q9Y446 797 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 RNF123Q5XPI4 1314 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 PHF2O75151 1096 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 CENPAP49450 140 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 SHCBP1Q8NEM2 672 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 OSBPL5Q9H0X9 879 aaPredicted RBP12.64□□□□□ -0.39
SRRM4-201ENST00000267260 PLEKHG1Q9ULL1 1385 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 GAS2L3Q86XJ1 694 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 NSL1Q96IY1 281 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 ECSITQ9BQ95 431 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 CITO14578 2027 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 A0A1W2PQC6 194 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 PIK3R1P27986 724 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 ATP12AP54707 1039 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 TRIM65Q6PJ69 517 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 EAF2Q96CJ1 260 aaPredicted RBP12.64□□□□□ -0.39
SRRM4-201ENST00000267260 CCDC126Q96EE4 140 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 TNIP3Q96KP6 325 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 DHX35Q9H5Z1 703 aaKnown RBP12.64□□□□□ -0.39
SRRM4-201ENST00000267260 AIM2O14862 343 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 PSTPIP1O43586 416 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 SLC16A1P53985 500 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 CTNNAL1Q9UBT7 734 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.64□□□□□ -0.39
SRRM4-201ENST00000267260 SYNCRIPO60506 623 aaKnown RBP12.64□□□□□ -0.39
SRRM4-201ENST00000267260 FAR2Q96K12 515 aa12.64□□□□□ -0.39
SRRM4-201ENST00000267260 PTPN12Q05209 780 aaKnown RBP12.63□□□□□ -0.39
SRRM4-201ENST00000267260 EDC3Q96F86 508 aaKnown RBP12.63□□□□□ -0.39
SRRM4-201ENST00000267260 VPS33BQ9H267 617 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 FAM25AB3EWG3 89 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 FAM25CB3EWG5 89 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 FAM25GB3EWG6 89 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 CYBBP04839 570 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 CROCCP3Q8IVE0 287 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 ENKURQ8TC29 256 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 ERP27Q96DN0 273 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 ZNF560Q96MR9 790 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 MED15Q96RN5 788 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 ROPN1BQ9BZX4 212 aaPredicted RBP12.63□□□□□ -0.39
SRRM4-201ENST00000267260 ROPN1Q9HAT0 212 aaPredicted RBP12.63□□□□□ -0.39
SRRM4-201ENST00000267260 DAPK2Q9UIK4 370 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 CCT8L1PA6NM43 557 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 ITIH2P19823 946 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 FGFR4P22455 802 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 KRT20P35900 424 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 PLIN5Q00G26 463 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 CACNB1Q02641 598 aaPredicted RBP12.63□□□□□ -0.39
SRRM4-201ENST00000267260 CLPTM1O96005 669 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 GYS1P13807 737 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 STAT3P40763 770 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 RCAN1P53805 252 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 CDC42EP1Q00587 391 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 KYNUQ16719 465 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 DPP10Q8N608 796 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 TSEN34Q9BSV6 310 aaKnown RBP12.63□□□□□ -0.39
SRRM4-201ENST00000267260 BHMT2Q9H2M3 363 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 GUCY1B2O75343 617 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 RCN1Q15293 331 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 USP13Q92995 863 aaPredicted RBP12.63□□□□□ -0.39
SRRM4-201ENST00000267260 CHAMP1Q96JM3 812 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 RNPC3Q96LT9 517 aaKnown RBP12.63□□□□□ -0.39
SRRM4-201ENST00000267260 MED26O95402 600 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 LSP1P33241 339 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 FLT3P36888 993 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 CSE1LP55060 971 aaKnown RBP12.63□□□□□ -0.39
SRRM4-201ENST00000267260 DRAP1Q14919 205 aaPredicted RBP12.63□□□□□ -0.39
SRRM4-201ENST00000267260 CCDC80Q76M96 950 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 PIGSQ96S52 555 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 DNAJC7Q99615 494 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 CARD14Q9BXL6 1004 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 KLHL4Q9C0H6 718 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 FEM1BQ9UK73 627 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 KIAA0391O15091 583 aaKnown RBP12.63□□□□□ -0.39
SRRM4-201ENST00000267260 BBOX1O75936 387 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 POLBP06746 335 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 ASNSP08243 561 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 MAGEA10P43363 369 aaPredicted RBP12.63□□□□□ -0.39
SRRM4-201ENST00000267260 COPAP53621 1224 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 PTK6Q13882 451 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 DOK7Q18PE1 504 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 TMEM179Q6ZVK1 233 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 ATPAF2Q8N5M1 289 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 C3orf20Q8ND61 904 aa12.63□□□□□ -0.39
SRRM4-201ENST00000267260 WDR48Q8TAF3 677 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms